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非整倍体甲状腺乳头状癌的比较基因组杂交、BRAF、RAS、RET及寡核苷酸芯片分析

Comparative genomic hybridization, BRAF, RAS, RET, and oligo-array analysis in aneuploid papillary thyroid carcinomas.

作者信息

Rodrigues Raquel, Roque Lúcia, Espadinha Carla, Pinto António, Domingues Rita, Dinis Joana, Catarino Ana, Pereira Teresa, Leite Valeriano

机构信息

Cytogenetic Laboratory, CIPM, Portuguese Cancer Institute, 1099-023 Lisbon, Portugal.

出版信息

Oncol Rep. 2007 Oct;18(4):917-26.

PMID:17786355
Abstract

Aneuploidy in papillary thyroid carcinomas (PTCs) is considered a marker of worse prognosis. Multiple genetic surveys have been performed in PTCs, however, we are not aware of any such studies in aneuploid PTCs. In order to contribute to a better comprehension of the genetic basis of this neoplasm's more aggressive behaviour in 17 aneuploid PTCs we performed a comparative genomic hybridization (CGH) analysis, studied the BRAF and RAS mutational status, searched for RET/PTC1 and RET/PTC3 rearrangements and determined their expression profile. Array results were validated by TaqMan and immunohistochemistry. CGH revealed multiple non-random chromosomal abnormalities. BRAFV600E and RAS mutations were found in 41.2% and 33% of the carcinomas respectively. None of the studied cases presented RET/PTC1 or RET/PTC3 rearrangement. When comparing array data with the chromosomal, mutational and clinical data we found that: a) loss of control of cellular transcription was of major relevance in this group of neoplasms, HMGA2 being one of the most overexpressed genes; b) gene expression correlated with the mutational status of PTCs, as in BRAF+ cases cMET and FN1 were concomitantly overexpressed; and c) death from disease and distant metastasis was associated to the overexpression of DDR2 and to the down-regulation of genes involved in immune, inflammatory response, signal transduction and cell adhesion processes. In conclusion we have identified in aneuploid PTCs a group of significantly altered molecules that may represent preferential targets for the development of new more efficient therapies in this type of cancer.

摘要

甲状腺乳头状癌(PTC)中的非整倍体被认为是预后较差的一个标志。此前已对PTC进行了多项基因调查,然而,我们尚未知晓有任何针对非整倍体PTC的此类研究。为了更好地理解这种肿瘤更具侵袭性的行为的遗传基础,我们对17例非整倍体PTC进行了比较基因组杂交(CGH)分析,研究了BRAF和RAS的突变状态,查找RET/PTC1和RET/PTC3重排情况,并确定了它们的表达谱。通过TaqMan和免疫组织化学对芯片结果进行了验证。CGH揭示了多个非随机的染色体异常。BRAFV600E和RAS突变分别在41.2%和33%的癌组织中被发现。所研究的病例均未出现RET/PTC1或RET/PTC3重排。当将芯片数据与染色体、突变及临床数据进行比较时,我们发现:a)细胞转录调控失控在这组肿瘤中具有重要意义,HMGA2是过度表达最明显的基因之一;b)基因表达与PTC的突变状态相关,如在BRAF+病例中,cMET和FN1同时过度表达;c)疾病死亡和远处转移与DDR2的过度表达以及参与免疫、炎症反应、信号转导和细胞黏附过程的基因下调有关。总之,我们在非整倍体PTC中鉴定出了一组显著改变的分子,它们可能是开发针对这类癌症更有效新疗法的优先靶点。

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