Alberstein Moti, Amit Maayan, Vaknin Keren, O'Donnell Amanda, Farhy Chen, Lerenthal Yaniv, Shomron Noam, Shaham Ohad, Sharrocks Andrew D, Ashery-Padan Ruth, Ast Gil
Department of Human Molecular Genetics and Biochemistry, Sackler Faculty of Medicine, Tel-Aviv University, Tel Aviv, Israel.
RNA. 2007 Nov;13(11):1988-99. doi: 10.1261/rna.492907. Epub 2007 Sep 5.
Alternative splicing plays a major role in transcriptome diversity and plasticity, but it is largely unknown how tissue-specific and embryogenesis-specific alternative splicing is regulated. The highly conserved splicing factor Slu7 is involved in 3' splice site selection and also regulates alternative splicing. We show that Slu7 has a unique spatial pattern of expression among human and mouse embryonic and adult tissues. We identified several functional Ets binding sites and GC-boxes in the human Slu7 (hSlu7) promoter region. The Ets and GC-box binding transcription factors, Elk-1 and Sp1, respectively, exerted opposite effects on hSlu7 transcription: Sp1 protein enhances and Elk-1 protein represses transcription in a dose-dependent manner. Sp1 protein bound to the hSlu7 promoter in vivo, and depletion of Sp1 by RNA interference (RNAi) repressed hSlu7 expression. Elk-1 protein bound to the hSlu7 promoter in vivo, and depletion of Elk-1 by RNAi caused an increase in the endogenous level of hSlu7 mRNA. Further, depletion of either Sp1 or Elk-1 affected alternative splicing. Our results provide indications of a complex transcription regulation mechanism that controls the spatial and temporal expression of Slu7, presumably allowing regulation of tissue-specific alternative splicing events.
可变剪接在转录组多样性和可塑性中起主要作用,但组织特异性和胚胎发育特异性可变剪接如何被调控在很大程度上尚不清楚。高度保守的剪接因子Slu7参与3'剪接位点选择,并且也调控可变剪接。我们发现Slu7在人和小鼠胚胎及成体组织中有独特的表达空间模式。我们在人Slu7(hSlu7)启动子区域鉴定出几个功能性Ets结合位点和GC盒。Ets和GC盒结合转录因子Elk-1和Sp1分别对hSlu7转录发挥相反作用:Sp1蛋白以剂量依赖方式增强转录,而Elk-1蛋白抑制转录。Sp1蛋白在体内与hSlu7启动子结合,通过RNA干扰(RNAi)降低Sp1水平会抑制hSlu7表达。Elk-1蛋白在体内与hSlu7启动子结合,通过RNAi降低Elk-1水平会导致hSlu7 mRNA内源性水平升高。此外,降低Sp1或Elk-1水平会影响可变剪接。我们的结果表明存在一种复杂的转录调控机制,该机制控制Slu7的时空表达,可能有助于调控组织特异性可变剪接事件。