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沙眼衣原体核糖核苷酸还原酶(RNR)中高价FeIIIFeIV状态的结构——电子顺磁共振、57Fe、1H-电子核双共振和X射线联合研究

Structure of the high-valent FeIIIFeIV state in ribonucleotide reductase (RNR) of Chlamydia trachomatis--combined EPR, 57Fe-, 1H-ENDOR and X-ray studies.

作者信息

Voevodskaya Nina, Galander Marcus, Högbom Martin, Stenmark Pal, McClarty Grant, Gräslund Astrid, Lendzian Friedhelm

机构信息

Department of Biochemistry and Biophysics, Stockholm University, S-10691 Stockholm, Sweden.

出版信息

Biochim Biophys Acta. 2007 Oct;1774(10):1254-63. doi: 10.1016/j.bbapap.2007.07.001. Epub 2007 Jul 17.

Abstract

A recently discovered subgroup of class I ribonucleotide reductase (RNR) found in the infectious bacterium Chlamydia trachomatis (C. trachomatis) was shown to exhibit a high-valent Fe(III)Fe(IV) center instead of the tyrosyl radical observed normally in all class I RNRs. The X-ray structure showed that C. trachomatis WT RNR has a phenylalanine at the position of the active tyrosine in Escherichia coli RNR. In this paper the X-ray structure of variant F127Y is presented, where the tyrosine is restored. Using (1)H- and (57)Fe-ENDOR spectroscopy it is shown, that in WT and variants F127Y and Y129F of C. trachomatis RNR, the Fe(III)Fe(IV) center is virtually identical with the short-lived intermediate X observed during the iron oxygen reconstitution reaction in class I RNR from E. coli. The experimental data are consistent with a recent theoretical model for X, proposing two bridging oxo ligands and one terminal water ligand. A surprising extension of the lifetime of the Fe(III)Fe(IV) state in C. trachomatis from a few seconds to several hours at room temperature was observed under catalytic conditions in the presence of substrate. These findings suggest a possible new role for the Fe(III)Fe(IV) state also in other class I RNR, during the catalytic radical transfer reaction, by which the substrate turnover is started.

摘要

在传染性细菌沙眼衣原体(C. trachomatis)中发现的I类核糖核苷酸还原酶(RNR)的一个最近发现的亚组显示出具有高价Fe(III)Fe(IV)中心,而不是在所有I类RNR中通常观察到的酪氨酸自由基。X射线结构表明,沙眼衣原体野生型RNR在大肠杆菌RNR中活性酪氨酸的位置有一个苯丙氨酸。本文展示了变体F127Y的X射线结构,其中酪氨酸被恢复。使用(1)H和(57)Fe-ENDOR光谱表明,在沙眼衣原体RNR的野生型以及变体F127Y和Y129F中,Fe(III)Fe(IV)中心实际上与在大肠杆菌I类RNR的铁氧重建反应中观察到的短寿命中间体X相同。实验数据与最近关于X的理论模型一致,该模型提出了两个桥连氧配体和一个末端水配体。在存在底物的催化条件下,在室温下观察到沙眼衣原体中Fe(III)Fe(IV)状态的寿命从几秒惊人地延长到了几个小时。这些发现表明,在催化自由基转移反应中,Fe(III)Fe(IV)状态在其他I类RNR中也可能具有新的作用,通过该反应启动底物周转。

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