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“组学”时代培养浮游细菌的重要性。

The importance of culturing bacterioplankton in the 'omics' age.

作者信息

Giovannoni Stephen, Stingl Ulrich

机构信息

Department of Microbiology, Oregon State University, 220 Nash Hall, Corvallis, Oregon 97333, USA.

出版信息

Nat Rev Microbiol. 2007 Oct;5(10):820-6. doi: 10.1038/nrmicro1752.

Abstract

Progress in the culturing of microorganisms that are important to ocean ecology has recently accelerated, and technology has been a factor in these advances. However, rather than a single technological breakthrough, a combination of methods now enable microbiologists to screen large numbers of cultures and manipulate cells that are growing at the low biomass densities that are characteristic of those found in seawater. The value of ribosomal RNA databases has been reaffirmed, as they provide nucleic-acid probes for screening to identify important new species in culture. The new cultivation approaches have focused on specific targets that ecological studies suggest are significant for geochemical transformations, such as SAR11. Here, we review how to cultivate marine oligotrophs and why it is worth the effort.

摘要

对海洋生态至关重要的微生物培养方面的进展近来加速了,技术一直是这些进展的一个因素。然而,促成这些进展的并非单一的技术突破,而是多种方法的结合,现在这些方法使微生物学家能够筛选大量培养物,并操控那些以海水典型的低生物量密度生长的细胞。核糖体RNA数据库的价值已得到重申,因为它们提供用于筛选的核酸探针,以识别培养物中的重要新物种。新的培养方法聚焦于生态研究表明对地球化学转化具有重要意义的特定目标,比如SAR11。在此,我们综述如何培养海洋寡营养微生物以及为何值得为之努力。

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