Botet Javier, Mateos Laura, Revuelta José L, Santos María A
Departamento de Microbiología y Genética, Instituto de Microbiología Bioquímica, Universidad de Salamanca/CSIC, Campus Miguel de Unamuno, 37007 Salamanca, Spain.
Eukaryot Cell. 2007 Nov;6(11):2102-11. doi: 10.1128/EC.00266-07. Epub 2007 Sep 14.
Large-scale phenotypic analyses have proved to be useful strategies in providing functional clues about the uncharacterized yeast genes. We used here a chemogenomic profiling of yeast deletion collections to identify the core of cellular processes challenged by treatment with the p-aminobenzoate/folate antimetabolite sulfanilamide. In addition to sulfanilamide-hypersensitive mutants whose deleted genes can be categorized into a number of groups, including one-carbon related metabolism, vacuole biogenesis and vesicular transport, DNA metabolic and cell cycle processes, and lipid and amino acid metabolism, two uncharacterized open reading frames (YHI9 and YMR289w) were also identified. A detailed characterization of YMR289w revealed that this gene was required for growth in media lacking p-aminobenzoic or folic acid and encoded a 4-amino-4-deoxychorismate lyase, which is the last of the three enzymatic activities required for p-aminobenzoic acid biosynthesis. In light of these results, YMR289w was designated ABZ2, in accordance with the accepted nomenclature. ABZ2 was able to rescue the p-aminobenzoate auxotrophy of an Escherichia coli pabC mutant, thus demonstrating that ABZ2 and pabC are functional homologues. Phylogenetic analyses revealed that Abz2p is the founder member of a new group of fungal 4-amino-4-deoxychorismate lyases that have no significant homology to its bacterial or plant counterparts. Abz2p appeared to form homodimers and dimerization was indispensable for its catalytic activity.
大规模表型分析已被证明是为未表征的酵母基因提供功能线索的有用策略。我们在此利用酵母缺失文库的化学基因组分析来确定受到对氨基苯甲酸/叶酸抗代谢物磺胺处理挑战的细胞过程核心。除了其缺失基因可分为多个组的磺胺敏感突变体,包括一碳相关代谢、液泡生物发生和囊泡运输、DNA代谢和细胞周期过程以及脂质和氨基酸代谢外,还鉴定出两个未表征的开放阅读框(YHI9和YMR289w)。对YMR289w的详细表征表明,该基因是在缺乏对氨基苯甲酸或叶酸的培养基中生长所必需的,并且编码一种4-氨基-4-脱氧分支酸裂解酶,这是对氨基苯甲酸生物合成所需的三种酶活性中的最后一种。鉴于这些结果,根据公认的命名法,YMR289w被命名为ABZ2。ABZ2能够挽救大肠杆菌pabC突变体的对氨基苯甲酸营养缺陷,从而证明ABZ2和pabC是功能同源物。系统发育分析表明,Abz2p是一组新的真菌4-氨基-4-脱氧分支酸裂解酶的创始成员,与细菌或植物对应物没有明显同源性。Abz2p似乎形成同源二聚体,二聚化对其催化活性不可或缺。