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A graph-based machine learning framework identifies critical properties of FVIII that lead to hemophilia A.一种基于图的机器学习框架识别出导致甲型血友病的凝血因子VIII的关键特性。
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Stable binding to phosphatidylserine-containing membranes requires conserved arginine residues in tandem C domains of blood coagulation factor VIII.与含磷脂酰丝氨酸的膜稳定结合需要凝血因子 VIII 的串联 C 结构域中的保守精氨酸残基。
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本文引用的文献

1
Ceruloplasmin revisited: structural and functional roles of various metal cation-binding sites.再探铜蓝蛋白:各种金属阳离子结合位点的结构和功能作用
Acta Crystallogr D Biol Crystallogr. 2007 Feb;63(Pt 2):240-8. doi: 10.1107/S090744490604947X. Epub 2007 Jan 16.
2
pH-dependent association of factor VIII chains: enhancement of affinity at physiological pH by Cu2+.凝血因子VIII链的pH依赖性缔合:Cu2+在生理pH下增强亲和力。
Biochim Biophys Acta. 2006 Jun;1764(6):1094-101. doi: 10.1016/j.bbapap.2006.04.004. Epub 2006 Apr 22.
3
Strategies towards a longer acting factor VIII.延长凝血因子 VIII 作用时间的策略。
Haemophilia. 2006 Jul;12 Suppl 3:42-51. doi: 10.1111/j.1365-2516.2006.01260.x.
4
Coot: model-building tools for molecular graphics.Coot:分子图形的模型构建工具。
Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 1):2126-32. doi: 10.1107/S0907444904019158. Epub 2004 Nov 26.
5
Surface-exposed hemophilic mutations across the factor VIII C2 domain have variable effects on stability and binding activities.因子VIII C2结构域上表面暴露的血友病突变对稳定性和结合活性有不同影响。
J Biol Chem. 2004 Dec 17;279(51):53691-8. doi: 10.1074/jbc.M409389200. Epub 2004 Oct 7.
6
Protein structure prediction and analysis using the Robetta server.使用Robetta服务器进行蛋白质结构预测与分析。
Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W526-31. doi: 10.1093/nar/gkh468.
7
The crystal structure of activated protein C-inactivated bovine factor Va: Implications for cofactor function.活化蛋白C失活的牛因子Va的晶体结构:对辅因子功能的启示
Proc Natl Acad Sci U S A. 2004 Jun 15;101(24):8918-23. doi: 10.1073/pnas.0403072101. Epub 2004 Jun 7.
8
WATERFALL SEQUENCE FOR INTRINSIC BLOOD CLOTTING.内源性凝血瀑布序列
Science. 1964 Sep 18;145(3638):1310-2. doi: 10.1126/science.145.3638.1310.
9
AN ENZYME CASCADE IN THE BLOOD CLOTTING MECHANISM, AND ITS FUNCTION AS A BIOCHEMICAL AMPLIFIER.血液凝固机制中的酶级联反应及其作为生物化学放大器的功能。
Nature. 1964 May 2;202:498-9. doi: 10.1038/202498a0.
10
The preparation and phospholipid binding property of the C2 domain of human factor VIII.人凝血因子VIII C2结构域的制备及其磷脂结合特性
Thromb Haemost. 2003 May;89(5):788-94.

凝血因子VIII的三级结构和结构域组织

The tertiary structure and domain organization of coagulation factor VIII.

作者信息

Shen Betty W, Spiegel Paul Clint, Chang Chong-Hwan, Huh Jae-Wook, Lee Jung-Sik, Kim Jeanman, Kim Young-Ho, Stoddard Barry L

机构信息

Program in Molecular Biophysics, Structure and Design, Division of Basic Sciences, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.

出版信息

Blood. 2008 Feb 1;111(3):1240-7. doi: 10.1182/blood-2007-08-109918. Epub 2007 Oct 26.

DOI:10.1182/blood-2007-08-109918
PMID:17965321
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2214755/
Abstract

Factor VIII (fVIII) is a serum protein in the coagulation cascade that nucleates the assembly of a membrane-bound protease complex on the surface of activated platelets at the site of a vascular injury. Hemophilia A is caused by a variety of mutations in the factor VIII gene and typically requires replacement therapy with purified protein. We have determined the structure of a fully active, recombinant form of factor VIII (r-fVIII), which consists of a heterodimer of peptides, respectively containing the A1-A2 and A3-C1-C2 domains. The structure permits unambiguous modeling of the relative orientations of the 5 domains of r-fVIII. Comparison of the structures of fVIII, fV, and ceruloplasmin indicates that the location of bound metal ions and of glycosylation, both of which are critical for domain stabilization and association, overlap at some positions but have diverged at others.

摘要

凝血因子VIII(fVIII)是凝血级联反应中的一种血清蛋白,在血管损伤部位的活化血小板表面,它能促使膜结合蛋白酶复合物的组装。甲型血友病是由凝血因子VIII基因的多种突变引起的,通常需要用纯化蛋白进行替代治疗。我们已经确定了一种完全活性的重组凝血因子VIII(r-fVIII)的结构,它由肽的异二聚体组成,分别包含A1-A2和A3-C1-C2结构域。该结构允许对r-fVIII的5个结构域的相对取向进行明确建模。fVIII、fV和铜蓝蛋白结构的比较表明,结合金属离子和糖基化的位置,这两者对结构域的稳定和结合都至关重要,在某些位置重叠,但在其他位置有所不同。