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估计中性群落的参数:从单个大样本到多个小样本。

Estimating parameters of neutral communities: from one single large to several small samples.

作者信息

Munoz François, Couteron Pierre, Ramesh B R, Etienne Rampal S

机构信息

French Institute of Pondicherry, 11 Saint Louis Street, Pondicherry 605001, India.

出版信息

Ecology. 2007 Oct;88(10):2482-8. doi: 10.1890/07-0049.1.

DOI:10.1890/07-0049.1
PMID:18027751
Abstract

The neutral theory of S. P. Hubbell postulates a two-scale hierarchical framework consisting of a metacommunity following the speciation-drift equilibrium characterized by the "biodiversity number" theta, and local communities following the migration-drift equilibrium characterized by the "migration rate" m (or the "fundamental dispersal number" I). While Etienne's sampling formula allows simultaneous estimation of theta and m from a single sample of a local community, its applicability to a network of (rather small) samples is questionable. We define here an alternative two-stage approach estimating theta from an adequate subset of the individuals sampled in the field (using Ewens' sampling formula) and m from community samples (using Etienne's sampling formula). We compare its results with the simultaneous estimation of theta and m (one-stage estimation), for simulated neutral samples and for 50 1-ha plots of evergreen forest in South India. The one-stage approach exhibits problems of bias and of poor differentiability between high-theta, low-m and low-theta, high-m solution domains. Conversely, the two-stage approach yielded reasonable estimates and is to be preferred when several small, scattered plots are available instead of a single large one.

摘要

S.P. 哈贝尔的中性理论假定了一个双尺度层次框架,该框架由一个遵循以“生物多样性数量”θ为特征的物种形成 - 漂变平衡的集合群落,以及遵循以“迁移率”m(或“基本扩散数”I)为特征的迁移 - 漂变平衡的局部群落组成。虽然艾蒂安的抽样公式允许从局部群落的单个样本中同时估计θ和m,但其对(相当小的)样本网络的适用性值得怀疑。我们在此定义一种替代的两阶段方法,即从实地采样个体的适当子集中估计θ(使用尤恩斯抽样公式),并从群落样本中估计m(使用艾蒂安抽样公式)。我们将其结果与对θ和m的同时估计(单阶段估计)进行比较,用于模拟中性样本以及印度南部50个1公顷常绿森林样地。单阶段方法存在偏差问题,并且在高θ、低m和低θ、高m解域之间的可区分性较差。相反,两阶段方法产生了合理的估计,并且当有几个小的、分散的样地而非单个大样地时更可取。

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2
Estimating and interpreting migration of Amazonian forests using spatially implicit and semi-explicit neutral models.使用空间隐式和半显式中性模型估算和解释亚马逊森林的迁移情况。
Ecol Evol. 2017 May 5;7(12):4254-4265. doi: 10.1002/ece3.2930. eCollection 2017 Jun.
3
Do spatially-implicit estimates of neutral migration comply with seed dispersal data in tropical forests?
中性迁移的空间隐含估计是否符合热带森林中的种子传播数据?
PLoS One. 2013 Aug 19;8(8):e72497. doi: 10.1371/journal.pone.0072497. eCollection 2013.
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The spatial limitations of current neutral models of biodiversity.当前生物多样性中性模型的空间局限性。
PLoS One. 2011 Mar 14;6(3):e14717. doi: 10.1371/journal.pone.0014717.