Macqueen Daniel J, Johnston Ian A
Gatty Marine Laboratory, School of Biology, University of St Andrews, St Andrews, Scotland, UK.
Dev Genes Evol. 2008 Jan;218(1):1-14. doi: 10.1007/s00427-007-0194-8. Epub 2007 Dec 11.
Follistatin (Fst) inhibits transforming growth factor-beta (TGF-B) proteins and is a known regulator of amniote myogenesis. Here, we used phylogenetic, genomic and experimental approaches to study its evolution in teleosts. Phylogenetic analyses suggested that one fst gene (fst1) is common to euteleosts, but a second gene (fst2) is conserved specifically within the Ostariophysi. Zebrafish fst1/2 respectively appear on chromosomes 5 and 10 in two genomic regions, each with conserved synteny to a single region in tetrapods. Interestingly, other teleosts have two corresponding chromosomal regions with a similar repertoire of paralogues. Phylogenetic reconstruction clustered these gene duplicates into two sister clades branching from tetrapod sequences. We suggest that an ancestral fst-containing chromosome was duplicated during the teleost whole genome duplication, but that fst2 was lost in lineages external to the Ostariophysi. We show that Fst1 of teleosts/mammals has evolved under strong purifying selection, but the N-terminal of Fst2 may have evolved under positive selection. Furthermore, the tissue-specific expression of zebrafish fst2 was restricted to fewer tissues compared to its paralogue and the single fst1 orthologue of Atlantic salmon (Salmo salar). Zebrafish fst1/2 may have subfunctionalized relative to non-duplicated vertebrate lineages, as several regions in the fst promoter of tetrapods were conserved with one paralogue, but not both. Finally, we examined the embryonic expression of fst1 in a teleost outside the Ostariophysi (Atlantic salmon). During segmentation, fst1 was expressed in the anterior somite compartment but was excluded from muscle progenitors that strongly expressed myogenic regulatory factors (MRFs). Later, fst1 was expressed in myogenic progenitors of the pectoral fin buds and also within the pax7(+) cell layer external to the myotome.
卵泡抑素(Fst)可抑制转化生长因子-β(TGF-β)蛋白,是已知的羊膜动物肌发生调节因子。在此,我们运用系统发育、基因组和实验方法来研究其在硬骨鱼中的进化。系统发育分析表明,一个卵泡抑素基因(fst1)在真骨鱼类中普遍存在,但第二个基因(fst2)仅在骨鳔总目鱼类中保守存在。斑马鱼的fst1/2分别位于5号和10号染色体的两个基因组区域,每个区域与四足动物的单个区域具有保守的同线性。有趣的是,其他硬骨鱼有两个相应的染色体区域,具有相似的旁系同源基因库。系统发育重建将这些基因复制体聚集成两个姐妹进化枝,从四足动物序列分支而来。我们认为,一条含有卵泡抑素的祖先染色体在硬骨鱼全基因组复制过程中发生了复制,但fst2在骨鳔总目鱼类以外的谱系中丢失了。我们发现,硬骨鱼/哺乳动物的Fst1在强烈的纯化选择下进化,但Fst2的N端可能在正选择下进化。此外,与它的旁系同源基因以及大西洋鲑(Salmo salar)的单个fst1直系同源基因相比,斑马鱼fst2的组织特异性表达局限于更少的组织。相对于未发生复制的脊椎动物谱系,斑马鱼的fst1/2可能已经发生了亚功能化,因为四足动物卵泡抑素启动子中的几个区域与其中一个旁系同源基因保守,但并非两个都保守。最后,我们检测了骨鳔总目鱼类以外的一种硬骨鱼(大西洋鲑)中fst1的胚胎表达。在体节形成期间,fst1在前部体节区表达,但被排除在强烈表达肌源性调节因子(MRFs)的肌肉祖细胞之外。后来,fst1在胸鳍芽的肌源性祖细胞以及肌节外部的pax7(+)细胞层中表达。