Feis Alessandro, Lapini Andrea, Catacchio Bruno, Brogioni Silvia, Foggi Paolo, Chiancone Emilia, Boffi Alberto, Smulevich Giulietta
Dipartimento di Chimica, Università di Firenze, Via della Lastruccia 3, I-50019 Sesto Fiorentino (FI), Italy.
Biochemistry. 2008 Jan 22;47(3):902-10. doi: 10.1021/bi701297f. Epub 2007 Dec 23.
The active site of the oxygen-avid truncated hemoglobin from Bacillus subtilis has been characterized by infrared absorption and resonance Raman spectroscopies, and the dynamics of CO rebinding after photolysis has been investigated by picosecond transient absorption spectroscopy. Resonance Raman experiments on the CO bound adduct revealed the presence of two Fe-CO stretching bands at 545 and 520 cm-1, respectively. Accordingly, two C-O stretching bands at 1924 and 1888 cm-1 were observed in infrared absorption and resonance Raman measurements. The very low C-O stretching frequency at 1888 cm-1 (corresponding to the extremely high RR stretching frequency at 545 cm-1) indicates unusually strong hydrogen bonding between CO and distal residues. On the basis of a comparison with other truncated hemoglobin it is envisaged that the two CO conformers are determined by specific interactions with the TrpG8 and TyrB10 residues. Mutation of TrpG8 to Leu deeply alters the hydrogen-bonding network giving rise mainly to a CO conformer characterized by a Fe-CO stretching band at 489 cm-1 and a CO stretching band at 1958 cm-1. Picosecond laser photolysis experiments carried out on the CO bound adduct revealed dynamical processes that take place within a few nanoseconds after photolysis. Picosecond dynamics is largely dominated by CO geminate rebinding and is consistent with strong H-bonding contributions of TyrB10 and TrpG8 to ligand stabilization.
来自枯草芽孢杆菌的对氧有高亲和力的截短血红蛋白的活性位点已通过红外吸收光谱和共振拉曼光谱进行了表征,并且通过皮秒瞬态吸收光谱研究了光解后CO重新结合的动力学。对与CO结合的加合物进行的共振拉曼实验表明,分别在545和520 cm-1处存在两个Fe-CO伸缩带。因此,在红外吸收和共振拉曼测量中观察到在1924和1888 cm-1处有两个C-O伸缩带。1888 cm-1处非常低的C-O伸缩频率(对应于545 cm-1处极高的RR伸缩频率)表明CO与远端残基之间存在异常强的氢键。基于与其他截短血红蛋白的比较,可以设想这两种CO构象异构体是由与TrpG8和TyrB10残基的特定相互作用决定的。将TrpG8突变为Leu会深刻改变氢键网络,主要产生一种CO构象异构体,其特征是在489 cm-1处有一个Fe-CO伸缩带,在1958 cm-1处有一个CO伸缩带。对与CO结合的加合物进行的皮秒激光光解实验揭示了光解后几纳秒内发生的动力学过程。皮秒动力学在很大程度上由CO双分子重新结合主导,并且与TyrB10和TrpG8对配体稳定化的强氢键贡献一致。