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A transcriptome database for astrocytes, neurons, and oligodendrocytes: a new resource for understanding brain development and function.一个针对星形胶质细胞、神经元和少突胶质细胞的转录组数据库:理解大脑发育和功能的新资源。
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2
Molecular comparison of GLT1+ and ALDH1L1+ astrocytes in vivo in astroglial reporter mice.体内胶质原纤维酸性蛋白阳性和醛脱氢酶 1L1 阳性星形胶质细胞的分子比较。
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Purification of astrocytes from transgenic rodents by fluorescence-activated cell sorting.通过荧光激活细胞分选从转基因啮齿动物中纯化星形胶质细胞。
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Generation of GFAP::GFP astrocyte reporter lines from human adult fibroblast-derived iPS cells using zinc-finger nuclease technology.利用锌指核酸酶技术从人成体成纤维细胞来源的诱导多能干细胞中生成GFAP::GFP星形胶质细胞报告基因系。
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Specific gene expression in mouse cortical astrocytes is mediated by a 1740bp-GFAP promoter-driven combined adeno-associated virus 2/5/7/8/9.小鼠皮质星形胶质细胞中的特异性基因表达由1740bp胶质纤维酸性蛋白(GFAP)启动子驱动的腺相关病毒2/5/7/8/9组合介导。
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Selective expression of eGFP in mouse perivascular astrocytes by modification of the Mlc1 gene using T2A-based ribosome skipping.通过基于T2A的核糖体跳跃修饰Mlc1基因,在小鼠血管周围星形胶质细胞中实现eGFP的选择性表达。
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GFAP promoter-controlled EGFP-expressing transgenic mice: a tool to visualize astrocytes and astrogliosis in living brain tissue.GFAP启动子控制的表达增强绿色荧光蛋白(EGFP)的转基因小鼠:一种在活体脑组织中可视化星形胶质细胞和星形胶质细胞增生的工具。
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Intercellular calcium signaling between astrocytes and oligodendrocytes via gap junctions in culture.培养中的星形胶质细胞和少突胶质细胞通过缝隙连接进行细胞间钙信号传递。
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Characterization and transformation potential of "Synthetic" astrocytes differentiated from murine embryonic stem cells.源自小鼠胚胎干细胞的“合成”星形胶质细胞的特性及转化潜能
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Blood-brain-barrier permeable fluorescent astrocyte probes.血脑屏障可渗透的荧光星形胶质细胞探针。
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Dual lineage origins contribute to neocortical astrocyte diversity.双谱系起源促成了新皮质星形胶质细胞的多样性。
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NT2-derived astrocyte-neuron co-culture reflects physiological relevance and offers research validity.源自NT2的星形胶质细胞-神经元共培养反映了生理相关性并提供了研究有效性。
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本文引用的文献

1
Disease gene candidates revealed by expression profiling of retinal ganglion cell development.通过视网膜神经节细胞发育的表达谱分析揭示的疾病基因候选物。
J Neurosci. 2007 Aug 8;27(32):8593-603. doi: 10.1523/JNEUROSCI.4488-06.2007.
2
Essential role for MFG-E8 as ligand for alphavbeta5 integrin in diurnal retinal phagocytosis.在昼夜视网膜吞噬作用中,MFG-E8作为αvβ5整合素的配体发挥重要作用。
Proc Natl Acad Sci U S A. 2007 Jul 17;104(29):12005-10. doi: 10.1073/pnas.0704756104. Epub 2007 Jul 9.
3
Engulfment is required for cell competition.细胞竞争需要吞噬作用。
Cell. 2007 Jun 15;129(6):1215-25. doi: 10.1016/j.cell.2007.03.054.
4
Evidence of a role for lactadherin in Alzheimer's disease.乳黏附素在阿尔茨海默病中作用的证据。
Am J Pathol. 2007 Mar;170(3):921-9. doi: 10.2353/ajpath.2007.060664.
5
MerTK activation during RPE phagocytosis in vivo requires alphaVbeta5 integrin.体内视网膜色素上皮细胞吞噬过程中的MerTK激活需要αVβ5整合素。
Adv Exp Med Biol. 2006;572:499-503. doi: 10.1007/0-387-32442-9_69.
6
Human DNA replication-related element binding factor (hDREF) self-association via hATC domain is necessary for its nuclear accumulation and DNA binding.人类DNA复制相关元件结合因子(hDREF)通过hATC结构域进行自我结合,这对于其在细胞核中的积累和与DNA的结合是必要的。
J Biol Chem. 2007 Mar 9;282(10):7563-75. doi: 10.1074/jbc.M607180200. Epub 2007 Jan 5.
7
Probe selection and expression index computation of Affymetrix Exon Arrays.Affymetrix 外显子芯片的探针选择和表达指数计算。
PLoS One. 2006 Dec 20;1(1):e88. doi: 10.1371/journal.pone.0000088.
8
Genome-wide atlas of gene expression in the adult mouse brain.成年小鼠大脑基因表达的全基因组图谱。
Nature. 2007 Jan 11;445(7124):168-76. doi: 10.1038/nature05453. Epub 2006 Dec 6.
9
The folate metabolic enzyme ALDH1L1 is restricted to the midline of the early CNS, suggesting a role in human neural tube defects.叶酸代谢酶ALDH1L1局限于早期中枢神经系统的中线,提示其在人类神经管缺陷中发挥作用。
J Comp Neurol. 2007 Jan 10;500(2):368-83. doi: 10.1002/cne.21179.
10
Functional genomic analysis of oligodendrocyte differentiation.少突胶质细胞分化的功能基因组分析
J Neurosci. 2006 Oct 25;26(43):10967-83. doi: 10.1523/JNEUROSCI.2572-06.2006.

一个针对星形胶质细胞、神经元和少突胶质细胞的转录组数据库:理解大脑发育和功能的新资源。

A transcriptome database for astrocytes, neurons, and oligodendrocytes: a new resource for understanding brain development and function.

作者信息

Cahoy John D, Emery Ben, Kaushal Amit, Foo Lynette C, Zamanian Jennifer L, Christopherson Karen S, Xing Yi, Lubischer Jane L, Krieg Paul A, Krupenko Sergey A, Thompson Wesley J, Barres Ben A

机构信息

Department of Neurobiology, Stanford University School of Medicine, Stanford, California 94305, USA.

出版信息

J Neurosci. 2008 Jan 2;28(1):264-78. doi: 10.1523/JNEUROSCI.4178-07.2008.

DOI:10.1523/JNEUROSCI.4178-07.2008
PMID:18171944
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6671143/
Abstract

Understanding the cell-cell interactions that control CNS development and function has long been limited by the lack of methods to cleanly separate neural cell types. Here we describe methods for the prospective isolation and purification of astrocytes, neurons, and oligodendrocytes from developing and mature mouse forebrain. We used FACS (fluorescent-activated cell sorting) to isolate astrocytes from transgenic mice that express enhanced green fluorescent protein (EGFP) under the control of an S100beta promoter. Using Affymetrix GeneChip Arrays, we then created a transcriptome database of the expression levels of >20,000 genes by gene profiling these three main CNS neural cell types at various postnatal ages between postnatal day 1 (P1) and P30. This database provides a detailed global characterization and comparison of the genes expressed by acutely isolated astrocytes, neurons, and oligodendrocytes. We found that Aldh1L1 is a highly specific antigenic marker for astrocytes with a substantially broader pattern of astrocyte expression than the traditional astrocyte marker GFAP. Astrocytes were enriched in specific metabolic and lipid synthetic pathways, as well as the draper/Megf10 and Mertk/integrin alpha(v)beta5 phagocytic pathways suggesting that astrocytes are professional phagocytes. Our findings call into question the concept of a "glial" cell class as the gene profiles of astrocytes and oligodendrocytes are as dissimilar to each other as they are to neurons. This transcriptome database of acutely isolated purified astrocytes, neurons, and oligodendrocytes provides a resource to the neuroscience community by providing improved cell-type-specific markers and for better understanding of neural development, function, and disease.

摘要

长期以来,由于缺乏有效分离神经细胞类型的方法,对控制中枢神经系统(CNS)发育和功能的细胞间相互作用的理解一直受到限制。在此,我们描述了从发育中和成熟的小鼠前脑前瞻性分离和纯化星形胶质细胞、神经元和少突胶质细胞的方法。我们使用荧光激活细胞分选(FACS)从在S100β启动子控制下表达增强型绿色荧光蛋白(EGFP)的转基因小鼠中分离星形胶质细胞。然后,我们使用Affymetrix基因芯片阵列,通过对出生后第1天(P1)至P30不同出生后年龄的这三种主要CNS神经细胞类型进行基因谱分析,创建了一个包含>20,000个基因表达水平的转录组数据库。该数据库提供了对急性分离的星形胶质细胞、神经元和少突胶质细胞所表达基因的详细全面表征和比较。我们发现醛脱氢酶1L1(Aldh1L1)是星形胶质细胞的一种高度特异性抗原标志物,其星形胶质细胞表达模式比传统的星形胶质细胞标志物胶质纤维酸性蛋白(GFAP)广泛得多。星形胶质细胞在特定的代谢和脂质合成途径以及Draper/Megf10和Mertk/整合素α(v)β5吞噬途径中富集,这表明星形胶质细胞是专职吞噬细胞。我们的发现对“胶质”细胞类别的概念提出了质疑,因为星形胶质细胞和少突胶质细胞的基因谱彼此之间以及与神经元的基因谱一样不同。这个急性分离纯化的星形胶质细胞、神经元和少突胶质细胞的转录组数据库通过提供改进的细胞类型特异性标志物以及更好地理解神经发育、功能和疾病,为神经科学界提供了一种资源。