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通过大肠杆菌乳醛脱氢酶辅酶结合结构域的单点突变增强辅酶结合

Enhancement of coenzyme binding by a single point mutation at the coenzyme binding domain of E. coli lactaldehyde dehydrogenase.

作者信息

Rodríguez-Zavala José Salud

机构信息

Departamento de Bioquímica, Instituto Nacional de Cardiología "Ignacio Chávez," Tlalpan D.F. 14080, Mexico.

出版信息

Protein Sci. 2008 Mar;17(3):563-70. doi: 10.1110/ps.073277108. Epub 2008 Jan 24.

Abstract

Phenylacetaldehyde dehydrogenase (PAD) and lactaldehyde dehydrogenase (ALD) share some structural and kinetic properties. One difference is that PAD can use NAD+ and NADP+, whereas ALD only uses NAD+. An acidic residue has been involved in the exclusion of NADP+ from the active site in pyridine nucleotide-dependent dehydrogenases. However, other factors may participate in NADP+ exclusion. In the present work, analysis of the sequence of the region involved in coenzyme binding showed that residue F180 of ALD might participate in coenzyme specificity. Interestingly, F180T mutation rendered an enzyme (ALD-F180T) with the ability to use NADP+. This enzyme showed an activity of 0.87 micromol/(min * mg) and K(m) for NADP+ of 78 microM. Furthermore, ALD-F180T exhibited a 16-fold increase in the V(m) /K(m) ratio with NAD+ as the coenzyme, from 12.8 to 211. This increase in catalytic efficiency was due to a diminution in K(m) for NAD+ from 47 to 7 microM and a higher V(m) from 0.51 to 1.48 micromol/(min * mg). In addition, an increased K(d) for NADH from 175 (wild-type) to 460 microM (mutant) indicates a faster product release and possibly a change in the rate-limiting step. For wild-type ALD it is described that the rate-limiting step is shared between deacylation and coenzyme dissociation. In contrast, in the present report the rate-limiting step in ALD-F180T was determined to be exclusively deacylation. In conclusion, residue F180 participates in the exclusion of NADP+ from the coenzyme binding site and disturbs the binding of NAD+.

摘要

苯乙醛脱氢酶(PAD)和乳醛脱氢酶(ALD)具有一些结构和动力学特性。一个不同之处在于,PAD可以使用NAD⁺和NADP⁺,而ALD只使用NAD⁺。在吡啶核苷酸依赖性脱氢酶中,一个酸性残基参与了将NADP⁺排除在活性位点之外的过程。然而,其他因素可能也参与了NADP⁺的排除。在本研究中,对参与辅酶结合区域的序列分析表明,ALD的F180残基可能参与辅酶特异性。有趣的是,F180T突变使一种酶(ALD-F180T)具有了使用NADP⁺的能力。这种酶对NADP⁺的活性为0.87微摩尔/(分钟·毫克),Kₘ为78微摩尔。此外,以NAD⁺为辅酶时,ALD-F180T的Vₘ/Kₘ比值增加了16倍,从12.8增至211。催化效率的提高是由于NAD⁺的Kₘ从47微摩尔降至7微摩尔,以及Vₘ从0.51微摩尔/(分钟·毫克)提高到1.48微摩尔/(分钟·毫克)。此外,NADH的Kd从175微摩尔(野生型)增加到460微摩尔(突变体),这表明产物释放更快,并且可能限速步骤发生了变化。对于野生型ALD,据描述限速步骤在脱酰基作用和辅酶解离之间共享。相比之下,在本报告中,ALD-F180T的限速步骤被确定为仅脱酰基作用。总之,F180残基参与了将NADP⁺排除在辅酶结合位点之外,并干扰了NAD⁺的结合。

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