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天然酶中新型生物活性的工程设计。

Engineering of Novel Bioactivity in the Natural Enzymes.

作者信息

Tiwari Vishvanath

机构信息

Department of Biochemistry, Central University of Rajasthan Ajmer, India.

出版信息

Front Chem. 2016 Oct 7;4:39. doi: 10.3389/fchem.2016.00039. eCollection 2016.

Abstract

Enzymes catalyze various biochemical functions with high efficiency and specificity. design of the enzyme leads to novel bioactivity in this natural biomolecule that give answers of some vital questions like crucial residues in binding with substrate, molecular evolution, cofactor specificity etc. Enzyme engineering technology involves directed evolution, rational designing, semi-rational designing, and structure-based designing using chemical modifications. Similarly, combined computational and evolution approaches together help in artificial designing of novel bioactivity in the natural enzyme. DNA shuffling, error prone PCR and staggered extension process are used to artificially redesign active site of enzyme, which can alter its efficiency and specificity. Modifications of the enzyme can lead to the discovery of new path of molecular evolution, designing of efficient enzymes, locating active sites and crucial residues, shift in substrate, and cofactor specificity. The methods and thermodynamics of designing of the enzyme are also discussed. Similarly, engineered thermophilic and psychrophilic enzymes attain substrate specificity and activity of mesophilic enzymes that may also be beneficial for industry and therapeutics.

摘要

酶高效且特异地催化各种生化功能。对酶的设计赋予了这种天然生物分子新的生物活性,从而解答了一些重要问题,如与底物结合的关键残基、分子进化、辅因子特异性等。酶工程技术包括定向进化、理性设计、半理性设计以及使用化学修饰的基于结构的设计。同样,计算与进化相结合的方法共同助力于在天然酶中人工设计新的生物活性。DNA改组、易错PCR和交错延伸过程用于人工重新设计酶的活性位点,这可以改变其效率和特异性。对酶的修饰能够带来分子进化新途径的发现、高效酶的设计、活性位点和关键残基的定位、底物转移以及辅因子特异性的改变。文中还讨论了酶设计的方法和热力学。同样,工程化的嗜热酶和嗜冷酶具备中温酶的底物特异性和活性,这对工业和治疗学也可能有益。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5bbf/5054688/90e5ff9e9311/fchem-04-00039-g0001.jpg

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