Ghirlando Rodolfo, Felsenfeld Gary
Laboratory of Molecular Biology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Department of Health and Human Services, Bethesda, MD 20892, USA.
J Mol Biol. 2008 Mar 7;376(5):1417-25. doi: 10.1016/j.jmb.2007.12.051. Epub 2008 Jan 3.
We have compared the physical properties of a 15.51-kb constitutive heterochromatin segment and a 16.17-kb facultative heterochromatin segment that form part of the chicken beta-globin locus. These segments were excised from an avian erythroleukemia cell line by restriction enzyme digestion and released from the nucleus, thus allowing measurement of the sedimentation coefficients by use of calibrated sucrose gradients. A determination of the buoyant density of the cross-linked particle in CsCl led to the total mass of the particles and their frictional coefficients, f. Despite the slight differences in nucleosome density, the measured value of f for both fragments was consistent with a rodlike particle having a diameter of 33-45 nm and a length corresponding to approximately six to seven nucleosomes per 11-nm turn. At higher ionic strengths we found no evidence of any abrupt conformational change, demonstrating that these chromatin fragments released from the nucleus did not assume the more compact conformations recently described for some reconstituted structures.
我们比较了构成鸡β-珠蛋白基因座一部分的15.51 kb组成型异染色质片段和16.17 kb兼性异染色质片段的物理性质。通过限制性内切酶消化从禽红细胞白血病细胞系中切除这些片段,并将其从细胞核中释放出来,从而可以使用校准的蔗糖梯度测量沉降系数。通过测定交联颗粒在CsCl中的浮力密度,可以得出颗粒的总质量及其摩擦系数f。尽管核小体密度存在细微差异,但两个片段的f测量值与直径为33 - 45 nm、长度对应于每11 nm匝约六到七个核小体的棒状颗粒一致。在较高离子强度下,我们没有发现任何突然构象变化的证据,这表明从细胞核中释放的这些染色质片段并没有呈现出最近描述的某些重构结构的更紧密构象。