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[利用SRAP标记检测野生狗牙根种质的遗传多样性]

[Genetic diversity of wild Cynodon dactylon germplasm detected by SRAP markers].

作者信息

Yi Yang-Jie, Zhang Xin-Quan, Huang Lin-Kai, Ling Yao, Ma Xiao, Liu Wei

机构信息

Department of Grassland, Sichuan Agricultural University, Ya'an 625014, China.

出版信息

Yi Chuan. 2008 Jan;30(1):94-100. doi: 10.3724/sp.j.1005.2008.00094.

Abstract

Sequence-related amplified polymorphism (SRAP) molecular markers were used to detect the genetic diversity of 32 wild accessions of Cynodon dactylon collected from Sichuan, Chongqing, Guizhou and Tibet, China. The following results were obtained. (1) Fourteen primer pairs produced 132 polymorphic bands, averaged 9.4 bands per primer pair. The percentage of polymorphic bands in average was 79.8%. The Nei's genetic similarity coefficient of the tested accessions ranged from 0.591 to 0.957, and the average Nei's coefficient was 0.759. These results suggested that there was rich genetic diversity among the wild resources of Cynodon dactylon tested. (2) Thirty two wild accessions were clustered into four groups. Moreover, the accessions from the same origin frequently clustered into one group. The findings implied that a correlation among the wild resources, geographical and ecological environment. (3) Genetic differentiation between and within six eco-geographical groups of C. dactylon was estimated by Shannon's diversity index, which showed that 65.56% genetic variance existed within group, and 34.44% genetic variance was among groups. (4) Based on Nei's unbiased measures of genetic identity, UPGMA cluster analysis measures of six eco-geographical groups of Cynodon dactylon, indicated that there was a correlation between genetic differentiation and eco-geographical habits among the groups.

摘要

利用序列相关扩增多态性(SRAP)分子标记对采自中国四川、重庆、贵州和西藏的32份野生狗牙根材料的遗传多样性进行了检测,结果如下:(1)14对引物共扩增出132条多态性条带,平均每对引物扩增出9.4条多态性条带,多态性条带平均比例为79.8%。供试材料间的Nei氏遗传相似系数在0.591至0.957之间,平均Nei氏系数为0.759。这些结果表明,供试狗牙根野生资源具有丰富的遗传多样性。(2)32份野生材料聚为4类,且来自相同产地的材料常聚为一类,这表明野生资源与地理和生态环境之间存在相关性。(3)利用Shannon多样性指数估算了狗牙根6个生态地理类群间及类群内的遗传分化,结果表明,65.56%的遗传变异存在于类群内,34.44%的遗传变异存在于类群间。(4)基于Nei氏无偏遗传一致性度量,对狗牙根6个生态地理类群进行UPGMA聚类分析,结果表明类群间的遗传分化与生态地理习性之间存在相关性。

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