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泰国耐多药结核分枝杆菌(MDRTB)菌株中rpoB基因突变的分布及一种快速突变检测方法的开发

Distribution of rpoB mutations among multidrug-resistant Mycobacterium tuberculosis (MDRTB) strains from Thailand and development of a rapid method for mutation detection.

作者信息

Prammananan T, Cheunoy W, Taechamahapun D, Yorsangsukkamol J, Phunpruch S, Phdarat P, Leechawengwong M, Chaiprasert A

机构信息

National Center for Genetic Engineering and Biotechnology, National Science and Technology Development Agency, Thailand Science Park, Pathumthani, Thailand.

出版信息

Clin Microbiol Infect. 2008 May;14(5):446-53. doi: 10.1111/j.1469-0691.2008.01951.x. Epub 2008 Feb 22.

DOI:10.1111/j.1469-0691.2008.01951.x
PMID:18294243
Abstract

Since rifampicin resistance is a surrogate marker for multidrug-resistant Mycobacterium tuberculosis (MDRTB), the present study aimed to investigate rpoB mutations conferring rifampicin resistance in M. tuberculosis strains from Thailand, and to develop a rapid, inexpensive and simple PCR-based method for rapid detection of MDRTB. Overall, 267 M. tuberculosis isolates, including 143 MDRTB isolates, were investigated. Isolates of the Beijing strain predominated among the MDRTB isolates (79.1%), but accounted for only 45.5% of the susceptible isolates. Mutations in the rpoB gene were found most commonly at codons 531, 526 and 516 (58%, 25.2% and 9.1%, respectively). A multiplex allele-specific PCR was developed and tested with 216 clinical isolates. In comparison with the proportion method, the method showed 94.2% sensitivity and 100% specificity, and had a 100% positive predictive value and a 95% negative predictive value, which suggested that this method could be useful for screening for MDRTB, particularly in resource-limited countries.

摘要

由于利福平耐药是耐多药结核分枝杆菌(MDRTB)的替代标志物,本研究旨在调查泰国结核分枝杆菌菌株中赋予利福平耐药性的rpoB基因突变,并开发一种基于PCR的快速、廉价且简单的方法用于快速检测MDRTB。总体而言,共调查了267株结核分枝杆菌分离株,其中包括143株MDRTB分离株。北京菌株的分离株在MDRTB分离株中占主导地位(79.1%),但在敏感分离株中仅占45.5%。rpoB基因的突变最常见于密码子531、526和516(分别为58%、25.2%和9.1%)。开发了一种多重等位基因特异性PCR,并对216株临床分离株进行了测试。与比例法相比,该方法的灵敏度为94.2%,特异性为100%,阳性预测值为100%,阴性预测值为95%,这表明该方法可用于筛查MDRTB,特别是在资源有限的国家。

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