Hirano Setsu, Tanaka Katsuyuki, Ohnishi Yasuo, Horinouchi Sueharu
Department of Biotechnology, Graduate School of Agriculture and Life Sciences, The University of Tokyo, Bunkyo-ku, Tokyo 113-8657, Japan.
Microbiology (Reading). 2008 Mar;154(Pt 3):905-914. doi: 10.1099/mic.0.2007/014381-0.
AtrA, a transcriptional activator for actII-ORF4, encoding the pathway-specific transcriptional activator of the actinorhodin biosynthetic gene cluster in Streptomyces coelicolor A3(2), has been shown to bind the region upstream from the promoter of strR, encoding the pathway-specific transcriptional activator of the streptomycin biosynthetic gene cluster in Streptomyces griseus [Uguru et al. (2005) Mol Microbiol 58, 131-150]. The atrA orthologue (atrA-g) in S. griseus was constitutively transcribed throughout growth from a promoter located about 250 nt upstream of the translational start codon, as determined by S1 nuclease mapping. DNase I footprinting showed that histidine-tagged AtrA-g bound an inverted repeat located upstream of strR at positions -117 to -142 relative to the transcriptional start point of strR as +1. This AtrA-g-binding site was between two AdpA-binding sites at approximately nucleotide positions -270 and -50. AdpA is a central transcriptional activator in the A-factor regulatory cascade and essential for the transcription of strR. AtrA-g and AdpA simultaneously bound the respective binding sites. In contrast to AdpA, AtrA-g was non-essential for strR transcription; an atrA-g-disrupted strain produced streptomycin on routine agar media to the same extent as the wild-type strain. However, the atrA-g-disrupted strain tended to produce a smaller amount of streptomycin than the wild-type strain under some conditions, for example, on Bennett agar containing 1 % maltose and on a minimal medium. Therefore, AtrA-g had a conditionally positive effect on streptomycin production, as a tuner, probably by enhancing the AdpA-dependent transcriptional activation of strR in a still unknown manner.
AtrA是放线紫红素生物合成基因簇的途径特异性转录激活因子ActII-ORF4的转录激活因子,编码天蓝色链霉菌A3(2)中放线紫红素生物合成基因簇的途径特异性转录激活因子,已被证明可结合strR启动子上游区域,strR编码灰色链霉菌中链霉素生物合成基因簇的途径特异性转录激活因子[Uguru等人(2005年),《分子微生物学》58卷,131 - 150页]。通过S1核酸酶作图确定,灰色链霉菌中的atrA同源物(atrA-g)在整个生长过程中由位于翻译起始密码子上游约250 nt处的启动子组成型转录。DNase I足迹分析表明,带有组氨酸标签的AtrA-g结合了相对于strR转录起始点(定为+1)在-117至-142位置的strR上游的一个反向重复序列。这个AtrA-g结合位点位于大约核苷酸位置-270和-50的两个AdpA结合位点之间。AdpA是A因子调节级联反应中的一个核心转录激活因子,对strR的转录至关重要。AtrA-g和AdpA同时结合各自的结合位点。与AdpA不同,AtrA-g对strR转录不是必需的;一个atrA-g缺失菌株在常规琼脂培养基上产生链霉素的程度与野生型菌株相同。然而,在某些条件下,例如在含有1%麦芽糖的贝内特琼脂和基本培养基上,atrA-g缺失菌株产生的链霉素往往比野生型菌株少。因此,AtrA-g作为一个调节因子,可能通过以一种仍未知的方式增强AdpA依赖的strR转录激活,对链霉素生产具有条件性的正向作用。