He Min, Qin Jian, Zhai Rihong, Wei Xiao, Wang Qi, Rong Minhua, Jiang Zhihua, Huang Yuanjiao, Zhang Zhiyong
Medical Scientific Research Center, Guangxi Medical University, Nanning, P. R. China.
Proteome Sci. 2008 Mar 10;6:10. doi: 10.1186/1477-5956-6-10.
A lack of sensitive and specific biomarkers is a major reason for the high rate of Primary hepatocellular carcinoma (HCC)-related mortality. The aim of this study was to investigate potential proteomic biomarkers specific for HCC.
81 patients with hepatitis B-related HCC and 33 healthy controls were randomly divided into a training set (33 HCC, 33 controls) and a testing set (48 HCC, 33 controls). Serum proteomic profiles were measured using Surface-enhanced laser desorption/ionization-time-of-flight mass spectroscopy (SELDI-TOF-MS).) A classification tree was established by Biomarker Pattern Software (BPS). Candidate SELDI peaks were isolated by tricine-SDS-PAGE, identified by HPLC-MS/MS and validated by immunohistochemistry (IHC) in liver tissues.
A total of 6 proteomic peaks (3157.33 m/z, 4177.02 m/z, 4284.79 m/z, 4300.80 m/z, 7789.87 m/z, and 7984.14 m/z) were chosen by BPS to establish a classification tree with the highest discriminatory power in the training set. The sensitivity and specificity of this classification tree were 95.92%, and 100% respectively in the testing set. A candidate marker of about 7984 m/z was isolated and identified as neutrophil-activating peptide 2 (NAP-2). IHC staining showed that NAP-2 signals were positive in HCC tissues but negative in adjacent tissues.
The NAP-2 may be a specific proteomic biomarker of hepatitis B-related HCC.
缺乏敏感且特异的生物标志物是原发性肝细胞癌(HCC)相关死亡率居高不下的主要原因。本研究旨在探究HCC特异性的潜在蛋白质组学生物标志物。
将81例乙型肝炎相关HCC患者和33例健康对照者随机分为训练集(33例HCC患者,33例对照者)和测试集(48例HCC患者,33例对照者)。采用表面增强激光解吸/电离飞行时间质谱(SELDI-TOF-MS)检测血清蛋白质组图谱。通过生物标志物模式软件(BPS)建立分类树。通过三羟甲基氨基甲烷-十二烷基硫酸钠聚丙烯酰胺凝胶电泳(tricine-SDS-PAGE)分离候选SELDI峰,通过高效液相色谱-串联质谱(HPLC-MS/MS)鉴定,并在肝组织中通过免疫组织化学(IHC)进行验证。
BPS选择了总共6个蛋白质组峰(3157.33 m/z、4177.02 m/z、4284.79 m/z、4300.80 m/z、7789.87 m/z和7984.14 m/z)来建立在训练集中具有最高鉴别力的分类树。该分类树在测试集中的敏感性和特异性分别为95.92%和100%。分离出一个约7984 m/z的候选标志物,并鉴定为中性粒细胞激活肽2(NAP-2)。免疫组织化学染色显示,NAP-2信号在HCC组织中呈阳性,但在相邻组织中呈阴性。
NAP-2可能是乙型肝炎相关HCC的特异性蛋白质组学生物标志物。