• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

逆转座子介导的基因复制是番茄果实形态变异的基础。

A retrotransposon-mediated gene duplication underlies morphological variation of tomato fruit.

作者信息

Xiao Han, Jiang Ning, Schaffner Erin, Stockinger Eric J, van der Knaap Esther

机构信息

Department of Horticulture and Crop Science, Ohio State University/Ohio Agricultural Research and Development Center, Wooster, OH 44691, USA.

出版信息

Science. 2008 Mar 14;319(5869):1527-30. doi: 10.1126/science.1153040.

DOI:10.1126/science.1153040
PMID:18339939
Abstract

Edible fruits, such as that of the tomato plant and other vegetable crops, are markedly diverse in shape and size. SUN, one of the major genes controlling the elongated fruit shape of tomato, was positionally cloned and found to encode a member of the IQ67 domain-containing family. We show that the locus arose as a result of an unusual 24.7-kilobase gene duplication event mediated by the long terminal repeat retrotransposon Rider. This event resulted in a new genomic context that increased SUN expression relative to that of the ancestral copy, culminating in an elongated fruit shape. Our discovery demonstrates that retrotransposons may be a major driving force in genome evolution and gene duplication, resulting in phenotypic change in plants.

摘要

可食用果实,如番茄植株和其他蔬菜作物的果实,在形状和大小上有显著差异。SUN是控制番茄果实细长形状的主要基因之一,已通过定位克隆得到,发现它编码一个含IQ67结构域家族的成员。我们表明,该基因座是由长末端重复逆转座子Rider介导的一次不寻常的24.7千碱基基因重复事件产生的。这一事件导致了一个新的基因组环境,相对于祖先拷贝增加了SUN的表达,最终形成了细长的果实形状。我们的发现表明,逆转座子可能是基因组进化和基因重复的主要驱动力,导致植物表型发生变化。

相似文献

1
A retrotransposon-mediated gene duplication underlies morphological variation of tomato fruit.逆转座子介导的基因复制是番茄果实形态变异的基础。
Science. 2008 Mar 14;319(5869):1527-30. doi: 10.1126/science.1153040.
2
Genome organization of the tomato sun locus and characterization of the unusual retrotransposon Rider.番茄sun基因座的基因组组织及异常逆转座子Rider的特征分析
Plant J. 2009 Oct;60(1):181-93. doi: 10.1111/j.1365-313X.2009.03946.x. Epub 2009 Jun 6.
3
Environmental and epigenetic regulation of Rider retrotransposons in tomato.番茄中 Rider 反转录转座子的环境和表观遗传调控。
PLoS Genet. 2019 Sep 16;15(9):e1008370. doi: 10.1371/journal.pgen.1008370. eCollection 2019 Sep.
4
Genome-wide identification, phylogeny and expression analysis of SUN, OFP and YABBY gene family in tomato.番茄 SUN、OFP 和 YABBY 基因家族的全基因组鉴定、系统发育和表达分析。
Mol Genet Genomics. 2013 Apr;288(3-4):111-29. doi: 10.1007/s00438-013-0733-0. Epub 2013 Jan 31.
5
Distribution of SUN, OVATE, LC, and FAS in the tomato germplasm and the relationship to fruit shape diversity.SUN、OVATE、LC和FAS在番茄种质中的分布及其与果实形状多样性的关系。
Plant Physiol. 2011 May;156(1):275-85. doi: 10.1104/pp.110.167577. Epub 2011 Mar 25.
6
The genetic basis of fruit morphology in horticultural crops: lessons from tomato and melon.园艺作物果实形态的遗传基础:来自番茄和甜瓜的经验教训。
J Exp Bot. 2014 Aug;65(16):4625-37. doi: 10.1093/jxb/eru017. Epub 2014 Feb 11.
7
A new family of Ty1-copia-like retrotransposons originated in the tomato genome by a recent horizontal transfer event.一个新的类Ty1-copia逆转座子家族通过最近的水平转移事件起源于番茄基因组。
Genetics. 2009 Apr;181(4):1183-93. doi: 10.1534/genetics.108.099150. Epub 2009 Jan 19.
8
SUN regulates vegetative and reproductive organ shape by changing cell division patterns.SUN 通过改变细胞分裂模式来调节营养器官和生殖器官的形态。
Plant Physiol. 2011 Nov;157(3):1175-86. doi: 10.1104/pp.111.181065. Epub 2011 Sep 15.
9
Detection of Quantitative Trait Loci (QTL) Associated with the Fruit Morphology of Tomato.番茄果实形态数量性状位点(QTL)的检测。
Genes (Basel). 2020 Sep 24;11(10):1117. doi: 10.3390/genes11101117.
10
Phenotypes associated with down-regulation of Sl-IAA27 support functional diversity among Aux/IAA family members in tomato.Sl-IAA27 下调相关表型支持番茄Aux/IAA 家族成员功能多样性。
Plant Cell Physiol. 2012 Sep;53(9):1583-95. doi: 10.1093/pcp/pcs101. Epub 2012 Jul 3.

引用本文的文献

1
How Structural Variations Influence Crop Improvement.结构变异如何影响作物改良。
Int J Mol Sci. 2025 Jul 10;26(14):6635. doi: 10.3390/ijms26146635.
2
The Nuclear Transcription Factor Regulates the Protrusion of Tomato Fruit Tip.核转录因子调控番茄果实顶端的突出。
Int J Mol Sci. 2025 Jul 6;26(13):6511. doi: 10.3390/ijms26136511.
3
Transcriptome-wide identification and systematic analysis of the Retrotransposon genes and their roles in ginsenoside biosynthesis in Panax ginseng.人参反转录转座子基因的全转录组鉴定与系统分析及其在人参皂苷生物合成中的作用
BMC Plant Biol. 2025 Jul 3;25(1):847. doi: 10.1186/s12870-025-06776-4.
4
Local gene duplications drive extensive NLR copy number variation across multiple genotypes of Theobroma cacao.局部基因重复驱动了可可树多种基因型间广泛的NLR拷贝数变异。
G3 (Bethesda). 2025 Sep 3;15(9). doi: 10.1093/g3journal/jkaf147.
5
Modulating the activity of the APC/C regulator SISAMBA improves the sugar and antioxidant content of tomato fruits.调节后期促进复合物/细胞周期体(APC/C)调节剂SISAMBA的活性可提高番茄果实的糖分和抗氧化剂含量。
Plant Biotechnol J. 2025 Sep;23(9):3540-3560. doi: 10.1111/pbi.70149. Epub 2025 Jun 8.
6
Multi-omics analyses unveil dual genetic loci governing four distinct watermelon flesh color phenotypes.多组学分析揭示了控制四种不同西瓜果肉颜色表型的双基因座。
Mol Hortic. 2025 May 14;5(1):46. doi: 10.1186/s43897-025-00166-y.
7
Understanding the Regulation Activities of Transposons in Driving the Variation and Evolution of Polyploid Plant Genome.了解转座子在驱动多倍体植物基因组变异和进化中的调控活动。
Plants (Basel). 2025 Apr 8;14(8):1160. doi: 10.3390/plants14081160.
8
Construction of a comprehensive library of repeated sequences for the annotation of Citrus genomes.构建用于柑橘基因组注释的重复序列综合文库。
BMC Genom Data. 2025 Apr 18;26(1):30. doi: 10.1186/s12863-025-01321-6.
9
The IQ67-domain protein IQD1 regulates fruit shape through complex multiprotein interactions in pepper (Capsicum annuum L.).IQ67结构域蛋白IQD1通过辣椒(Capsicum annuum L.)中复杂的多蛋白相互作用来调控果实形状。
Plant Biotechnol J. 2025 Jul;23(7):2651-2666. doi: 10.1111/pbi.70078. Epub 2025 Apr 11.
10
Genetic responses of plants to urban environmental challenges.植物对城市环境挑战的遗传反应。
Planta. 2025 Apr 4;261(5):102. doi: 10.1007/s00425-025-04678-1.