Hanna Ebert Seixas, Roque-Barreira Maria-Cristina, Mendes Guilherme Martines Teixeira, Soares Sandro Gomes, Brocchi Marcelo
Departamento de Biologia Celular e Molecular e Bioagentes Patogênicos, Faculdade de Medicina de Ribeirão Preto, Universidade de São Paulo, Av. Bandeirantes 3900, Ribeirão Preto, SP 14049-900, Brazil.
Protein Expr Purif. 2008 Jun;59(2):197-202. doi: 10.1016/j.pep.2008.01.015. Epub 2008 Feb 5.
Dps, found in many eubacterial and archaebacterial species, appears to protect cells from oxidative stress and/or nutrient-limited environment. Dps has been shown to accumulate during the stationary phase, to bind to DNA non-specifically, and to form a crystalline structure that compacts and protects the chromosome. Our previous results have indicated that Dps is glycosylated at least for a certain period of the bacterial cell physiology and this glycosylation is thought to be orchestrated by some factors not yet understood, explaining our difficulties in standardizing the Dps purification process. In the present work, the open reading frame of the dps gene, together with all the upstream regulatory elements, were cloned into a PCR cloning vector. As a result, the expression of dps was also controlled by the plasmid system introduced in the bacterial cell. The gene was then over-expressed regardless of the growth phase of the culture and a glycosylated fraction was purified to homogeneity by lectin-immobilized chromatography assay. Unlike the high level expression of Dps in Salmonella cells, less than 1% of the recombinant protein was purified by affinity chromatography using jacalin column. Sequencing and mass spectrometry data confirmed the identity of the dps gene and the protein, respectively. In spite of the low level of purification of the jacalin-binding Dps, this work shall aid further investigations into the mechanism of Dps glycosylation.
Dps存在于许多真细菌和古细菌物种中,似乎能保护细胞免受氧化应激和/或营养受限环境的影响。研究表明,Dps在稳定期积累,能非特异性地与DNA结合,并形成一种晶体结构,使染色体压缩并得到保护。我们之前的研究结果表明,Dps在细菌细胞生理的至少某一阶段会发生糖基化,且这种糖基化被认为是由一些尚不清楚的因素所调控的,这也解释了我们在标准化Dps纯化过程中遇到的困难。在本研究中,dps基因的开放阅读框连同所有上游调控元件被克隆到一个PCR克隆载体中。结果,dps的表达也受引入细菌细胞中的质粒系统控制。然后,无论培养物处于何种生长阶段,该基因都能过量表达,并且通过凝集素固定色谱分析法将糖基化部分纯化至同质。与沙门氏菌细胞中Dps的高水平表达不同,使用jacalin柱通过亲和色谱法纯化的重组蛋白不到1%。测序和质谱数据分别证实了dps基因和蛋白质的身份。尽管jacalin结合的Dps纯化水平较低,但这项工作将有助于进一步研究Dps糖基化的机制。