Ibañes Marta, Izpisúa Belmonte Juan Carlos
Department of Estructura i Constituents de la Matèria, University of Barcelona, Barcelona, Spain.
Mol Syst Biol. 2008;4:176. doi: 10.1038/msb.2008.14. Epub 2008 Mar 25.
Morphogen gradients, which specify different fates for cells in a direct concentration-dependent manner, are a highly influential framework in which pattern formation processes in developmental biology can be characterized. A common analysis approach is combining experimental and theoretical strategies, thereby fostering relevant data on the dynamics and transduction of gradients. The mechanisms of morphogen transport and conversion from graded information to binary responses are some of the topics on which these combined strategies have shed light. Herein, we review these data, emphasizing, on the one hand, how theoretical approaches have been helpful and, on the other hand, how these have been combined with experimental strategies. In addition, we discuss those cases in which gradient formation and gradient interpretation at the molecular and/or cellular level may influence each other within a mutual feedback loop. To understand this interplay and the features it yields, it becomes essential to take system-level approaches that combine experimental and theoretical strategies.
形态发生素梯度以直接的浓度依赖方式为细胞指定不同的命运,是发育生物学中模式形成过程得以表征的一个极具影响力的框架。一种常见的分析方法是将实验和理论策略相结合,从而获取有关梯度动态和转导的相关数据。形态发生素运输机制以及从梯度信息到二元反应的转换机制是这些联合策略所阐明的部分主题。在此,我们回顾这些数据,一方面强调理论方法如何发挥作用,另一方面强调这些方法如何与实验策略相结合。此外,我们讨论在分子和/或细胞水平上梯度形成和梯度解读可能在相互反馈回路中相互影响的那些情况。为了理解这种相互作用及其产生的特征,采用结合实验和理论策略的系统层面方法变得至关重要。