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拟南芥根生长与发育的建模

Modeling Arabidopsis root growth and development.

作者信息

Ibañes Marta

机构信息

Departament de Física de la Matèria Condensada, Universitat de Barcelona, Martí i Franquès 1, 08028 Barcelona, Spain.

Universitat de Barcelona Institute of Complex Systems (UBICS), Universitat de Barcelona, 08028 Barcelona, Spain.

出版信息

Plant Physiol. 2025 Feb 7;197(2). doi: 10.1093/plphys/kiaf045.

DOI:10.1093/plphys/kiaf045
PMID:40036788
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11878784/
Abstract

Modeling has been used to explore various aspects of primary root development and growth in Arabidopsis thaliana, thanks to enormous advances in the genetic and biochemical bases of cell division, cell growth and differentiation, and, more recently, progress in measuring these processes. Modeling has facilitated the characterization of the regulations involved in these processes and the system properties that they confer. Recently, the mechanical-physical properties of root growth have started to be determined with the help of modeling. Here we review recent progress in modeling approaches used to examine root development and growth, from the transcriptional and signaling regulation of cell decisions to the mechanical basis of morphogenesis, and we highlight common features and future challenges.

摘要

由于在细胞分裂、细胞生长和分化的遗传及生化基础方面取得了巨大进展,并且最近在测量这些过程方面也取得了进展,建模已被用于探索拟南芥主根发育和生长的各个方面。建模有助于表征这些过程中涉及的调控以及它们所赋予的系统特性。最近,借助建模已开始确定根生长的机械物理特性。在这里,我们回顾了用于研究根发育和生长的建模方法的最新进展,从细胞决策的转录和信号调控到形态发生的机械基础,并强调了共同特征和未来挑战。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5f0a/11878784/3240ef53239a/kiaf045f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5f0a/11878784/9e43285c31a9/kiaf045f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5f0a/11878784/c23cbded09b7/kiaf045f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5f0a/11878784/3240ef53239a/kiaf045f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5f0a/11878784/9e43285c31a9/kiaf045f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5f0a/11878784/c23cbded09b7/kiaf045f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5f0a/11878784/3240ef53239a/kiaf045f3.jpg

相似文献

1
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本文引用的文献

1
Conserved physical mechanisms of cell and tissue elongation.细胞和组织伸长的保守物理机制。
Development. 2024 May 15;151(10). doi: 10.1242/dev.202687. Epub 2024 May 20.
2
On the mechanical origins of waving, coiling and skewing in roots.关于根中波动、卷曲和偏斜的力学起源。
Proc Natl Acad Sci U S A. 2024 Mar 12;121(11):e2312761121. doi: 10.1073/pnas.2312761121. Epub 2024 Mar 6.
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SHR and SCR coordinate root patterning and growth early in the cell cycle.SHR 和 SCR 协调细胞周期早期的根模式和生长。
Nature. 2024 Feb;626(7999):611-616. doi: 10.1038/s41586-023-06971-z. Epub 2024 Jan 31.
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Structure and growth of plant cell walls.植物细胞壁的结构与生长。
Nat Rev Mol Cell Biol. 2024 May;25(5):340-358. doi: 10.1038/s41580-023-00691-y. Epub 2023 Dec 15.
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J Exp Bot. 2024 Jan 10;75(2):620-630. doi: 10.1093/jxb/erad383.
6
Brassinosteroid coordinates cell layer interactions in plants via cell wall and tissue mechanics.油菜素内酯通过细胞壁和组织力学协调植物中的细胞层相互作用。
Science. 2023 Jun 23;380(6651):1275-1281. doi: 10.1126/science.adf0752. Epub 2023 Jun 22.
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Gibberellin and abscisic acid transporters facilitate endodermal suberin formation in Arabidopsis.赤霉素和脱落酸转运蛋白促进拟南芥内胚层的角质形成。
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Complementary roles for auxin and auxin signalling revealed by reverse engineering lateral root stable prebranch site formation.通过反向工程侧根稳定的分支前位点形成揭示了生长素和生长素信号的互补作用。
Development. 2022 Nov 15;149(22). doi: 10.1242/dev.200927. Epub 2022 Nov 21.
10
Computational modeling and quantitative physiology reveal central parameters for brassinosteroid-regulated early cell physiological processes linked to elongation growth of the root.计算建模和定量生理学揭示了与根伸长生长相关的油菜素内酯调节的早期细胞生理过程的核心参数。
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