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南极洲维多利亚地北部土壤中的微生物群落组成

Microbial community composition in soils of Northern Victoria Land, Antarctica.

作者信息

Niederberger Thomas D, McDonald Ian R, Hacker Amy L, Soo Rochelle M, Barrett John E, Wall Diana H, Cary S Craig

机构信息

Department of Biological Sciences, University of Waikato, Hamilton, New Zealand.

出版信息

Environ Microbiol. 2008 Jul;10(7):1713-24. doi: 10.1111/j.1462-2920.2008.01593.x. Epub 2008 Mar 28.

Abstract

Biotic communities and ecosystem dynamics in terrestrial Antarctica are limited by an array of extreme conditions including low temperatures, moisture and organic matter availability, high salinity, and a paucity of biodiversity to facilitate key ecological processes. Recent studies have discovered that the prokaryotic communities in these extreme systems are highly diverse with patchy distributions. Investigating the physical and biological controls over the distribution and activity of microbial biodiversity in Victoria Land is essential to understanding ecological functioning in this region. Currently, little information on the distribution, structure and activity of soil communities anywhere in Victoria Land are available, and their sensitivity to potential climate change remains largely unknown. We investigated soil microbial communities from low- and high-productivity habitats in an isolated Antarctic location to determine how the soil environment impacts microbial community composition and structure. The microbial communities in Luther Vale, Northern Victoria Land were analysed using bacterial 16S rRNA gene clone libraries and were related to soil geochemical parameters and classical morphological analysis of soil metazoan invertebrate communities. A total of 323 16S rRNA gene sequences analysed from four soils spanning a productivity gradient indicated a high diversity (Shannon-Weaver values > 3) of phylotypes within the clone libraries and distinct differences in community structure between the two soil productivity habitats linked to water and nutrient availability. In particular, members of the Deinococcus/Thermus lineage were found exclusively in the drier, low-productivity soils, while Gammaproteobacteria of the genus Xanthomonas were found exclusively in high-productivity soils. However, rarefaction curves indicated that these microbial habitats remain under-sampled. Our results add to the recent literature suggesting that there is a higher biodiversity within Antarctic soils than previously expected.

摘要

南极陆地的生物群落和生态系统动态受到一系列极端条件的限制,包括低温、水分和有机质可用性、高盐度以及促进关键生态过程的生物多样性匮乏。最近的研究发现,这些极端系统中的原核生物群落高度多样且分布不均。研究维多利亚地微生物生物多样性分布和活动的物理及生物控制因素,对于理解该地区的生态功能至关重要。目前,关于维多利亚地任何地方土壤群落的分布、结构和活动的信息都很少,而且它们对潜在气候变化的敏感性在很大程度上仍然未知。我们调查了南极一个孤立地点低生产力和高生产力栖息地的土壤微生物群落,以确定土壤环境如何影响微生物群落组成和结构。利用细菌16S rRNA基因克隆文库分析了维多利亚地北部路德谷的微生物群落,并将其与土壤地球化学参数以及土壤后生无脊椎动物群落的经典形态分析相关联。从跨越生产力梯度的四种土壤中分析得到的总共323个16S rRNA基因序列表明,克隆文库中的系统发育型具有高度多样性(香农-韦弗值>3),并且与水和养分可用性相关的两种土壤生产力栖息地之间的群落结构存在明显差异。特别是,嗜热栖热放线菌/嗜热栖热放线菌谱系的成员仅在较干燥、低生产力的土壤中发现,而黄单胞菌属的γ-变形菌仅在高生产力土壤中发现。然而,稀疏曲线表明这些微生物栖息地的采样仍然不足。我们的结果补充了最近的文献,表明南极土壤中的生物多样性比以前预期的要高。

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