Patient Samuel, Wieser Daniela, Kleen Michael, Kretschmann Ernst, Jesus Martin Maria, Apweiler Rolf
The European Bioinformatics Institute, Hinxton, Cambridge CB10 1SD, UK.
Bioinformatics. 2008 May 15;24(10):1321-2. doi: 10.1093/bioinformatics/btn122. Epub 2008 Apr 4.
Programmatic access to the UniProt Knowledgebase (UniProtKB) is essential for many bioinformatics applications dealing with protein data. We have created a Java library named UniProtJAPI, which facilitates the integration of UniProt data into Java-based software applications. The library supports queries and similarity searches that return UniProtKB entries in the form of Java objects. These objects contain functional annotations or sequence information associated with a UniProt entry. Here, we briefly describe the UniProtJAPI and demonstrate its usage.
对于许多处理蛋白质数据的生物信息学应用程序来说，通过编程方式访问通用蛋白质数据库（UniProtKB）至关重要。我们创建了一个名为UniProtJAPI的Java库，它有助于将UniProt数据集成到基于Java的软件应用程序中。该库支持以Java对象形式返回UniProtKB条目的查询和相似性搜索。这些对象包含与UniProt条目相关的功能注释或序列信息。在这里，我们简要描述UniProtJAPI并演示其用法。
