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宏蛋白质组学为活性污泥废水处理提供了功能方面的见解。

Metaproteomics provides functional insight into activated sludge wastewater treatment.

作者信息

Wilmes Paul, Wexler Margaret, Bond Philip L

机构信息

School of Environmental Sciences, University of East Anglia, Norwich, United Kingdom.

出版信息

PLoS One. 2008 Mar 12;3(3):e1778. doi: 10.1371/journal.pone.0001778.

Abstract

BACKGROUND

Through identification of highly expressed proteins from a mixed culture activated sludge system this study provides functional evidence of microbial transformations important for enhanced biological phosphorus removal (EBPR).

METHODOLOGY/PRINCIPAL FINDINGS: A laboratory-scale sequencing batch reactor was successfully operated for different levels of EBPR, removing around 25, 40 and 55 mg/l P. The microbial communities were dominated by the uncultured polyphosphate-accumulating organism "Candidatus Accumulibacter phosphatis". When EBPR failed, the sludge was dominated by tetrad-forming alpha-Proteobacteria. Representative and reproducible 2D gel protein separations were obtained for all sludge samples. 638 protein spots were matched across gels generated from the phosphate removing sludges. 111 of these were excised and 46 proteins were identified using recently available sludge metagenomic sequences. Many of these closely match proteins from "Candidatus Accumulibacter phosphatis" and could be directly linked to the EBPR process. They included enzymes involved in energy generation, polyhydroxyalkanoate synthesis, glycolysis, gluconeogenesis, glycogen synthesis, glyoxylate/TCA cycle, fatty acid beta oxidation, fatty acid synthesis and phosphate transport. Several proteins involved in cellular stress response were detected.

CONCLUSIONS/SIGNIFICANCE: Importantly, this study provides direct evidence linking the metabolic activities of "Accumulibacter" to the chemical transformations observed in EBPR. Finally, the results are discussed in relation to current EBPR metabolic models.

摘要

背景

通过鉴定混合培养活性污泥系统中高表达的蛋白质,本研究为强化生物除磷(EBPR)中重要的微生物转化提供了功能证据。

方法/主要发现:一个实验室规模的序批式反应器成功运行于不同水平的EBPR,去除约25、40和55mg/l的磷。微生物群落以未培养的聚磷菌“聚磷菌属”为主。当EBPR失败时,污泥以形成四联的α-变形菌为主。对所有污泥样品进行了具有代表性和可重复性的二维凝胶蛋白分离。从除磷污泥产生的凝胶中匹配到638个蛋白点。其中111个被切除,46种蛋白质通过最近可用的污泥宏基因组序列进行了鉴定。其中许多与“聚磷菌属”的蛋白质密切匹配,并且可以直接与EBPR过程相关联。它们包括参与能量产生、聚羟基脂肪酸酯合成、糖酵解、糖异生、糖原合成、乙醛酸/三羧酸循环、脂肪酸β氧化、脂肪酸合成和磷转运的酶。检测到几种参与细胞应激反应的蛋白质。

结论/意义:重要的是,本研究提供了直接证据,将“聚磷菌属”的代谢活动与EBPR中观察到的化学转化联系起来。最后,结合当前EBPR代谢模型对结果进行了讨论。

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