Molnes Janne, Bjørkhaug Lise, Søvik Oddmund, Njølstad Pål R, Flatmark Torgeir
Department of Clinical Medicine, University of Bergen, Norway.
FEBS J. 2008 May;275(10):2467-81. doi: 10.1111/j.1742-4658.2008.06391.x. Epub 2008 Apr 7.
alpha-D-Glucose activates glucokinase (EC 2.7.1.1) on its binding to the active site by inducing a global hysteretic conformational change. Using intrinsic tryptophan fluorescence as a probe on the alpha-D-glucose induced conformational changes in the pancreatic isoform 1 of human glucokinase, key residues involved in the process were identified by site-directed mutagenesis. Single-site W-->F mutations enabled the assignment of the fluorescence enhancement (DeltaF/F(0)) mainly to W99 and W167 in flexible loop structures, but the biphasic time course of DeltaF/F(0) is variably influenced by all tryptophan residues. The human glucokinase-alpha-D-glucose association (K(d) = 4.8 +/- 0.1 mm at 25 degrees C) is driven by a favourable entropy change (DeltaS = 150 +/- 10 J.mol(-1).K(-1)). Although X-ray crystallographic studies have revealed the alpha-d-glucose binding residues in the closed state, the contact residues that make essential contributions to its binding to the super-open conformation remain unidentified. In the present study, we combined functional mutagenesis with structural dynamic analyses to identify residue contacts involved in the initial binding of alpha-d-glucose and conformational transitions. The mutations N204A, D205A or E256A/K in the L-domain resulted in enzyme forms that did not bind alpha-D-glucose at 200 mm and were essentially catalytically inactive. Our data support a molecular dynamic model in which a concerted binding of alpha-D-glucose to N204, N231 and E256 in the super-open conformation induces local torsional stresses at N204/D205 propagating towards a closed conformation, involving structural changes in the highly flexible interdomain connecting region II (R192-N204), helix 5 (V181-R191), helix 6 (D205-Y215) and the C-terminal helix 17 (R447-K460).
α-D-葡萄糖通过诱导全局性滞后构象变化,在与活性位点结合时激活葡萄糖激酶(EC 2.7.1.1)。利用内在色氨酸荧光作为探针,研究α-D-葡萄糖诱导的人葡萄糖激酶胰腺同工型1的构象变化,通过定点诱变确定了该过程中涉及的关键残基。单一位点的W→F突变使得荧光增强(ΔF/F₀)主要归因于柔性环结构中的W99和W167,但ΔF/F₀的双相时间进程受到所有色氨酸残基的不同影响。人葡萄糖激酶与α-D-葡萄糖的缔合(25℃时Kd = 4.8±0.1 mM)由有利的熵变(ΔS = 150±10 J·mol⁻¹·K⁻¹)驱动。尽管X射线晶体学研究已经揭示了处于闭合状态下的α-D-葡萄糖结合残基,但对其与超开放构象结合起关键作用的接触残基仍未确定。在本研究中,我们将功能诱变与结构动力学分析相结合,以确定参与α-D-葡萄糖初始结合和构象转变的残基接触。L结构域中的N204A、D205A或E256A/K突变产生的酶形式在200 mM时不结合α-D-葡萄糖,且基本上无催化活性。我们的数据支持一个分子动力学模型,即α-D-葡萄糖在超开放构象下与N204、N231和E256协同结合,在N204/D205处诱导局部扭转应力,向闭合构象传播,涉及高柔性的结构域间连接区域II(R192-N204)、螺旋5(V181-R191)、螺旋6(D205-Y215)和C末端螺旋17(R447-K460)的结构变化。