Norman Anders, Hansen Lars Hestbjerg, She Qunxin, Sørensen Søren Johannes
Department of Biology, Evolution and Microbiology Section, University of Copenhagen, Sølvgade 83H, DK-1307 Copenhagen K, Denmark.
Plasmid. 2008 Jul;60(1):59-74. doi: 10.1016/j.plasmid.2008.03.003. Epub 2008 Apr 28.
The large conjugative multidrug resistance (MDR) plasmid pOLA52 was sequenced and annotated. The plasmid encodes two phenotypes normally associated with the chromosomes of opportunistic pathogens, namely MDR via a resistance-nodulation-division (RND)-type efflux-pump (oqxAB), and the formation of type 3 fimbriae (mrkABCDF). The plasmid was found to be 51,602 bp long with 68 putative genes. About half of the plasmid constituted a conserved IncX1-type backbone with predicted regions for conjugation, replication and partitioning, as well as a toxin/antitoxin (TA) plasmid addiction system. The plasmid was also classified as IncX1 with incompatibility testing. The conjugal transfer and plasmid maintenance regions of pOLA52 therefore seem to represent IncX1 orthologues of the well-characterized IncX2 plasmid R6K. Sequence homology searches in GenBank also suggested a considerably higher prevalence of IncX1 group plasmids than IncX2. The 21 kb 'genetic load' region of pOLA52 was shown to consist of a mosaic, among other things a fragmented Tn3 transposon encoding ampicillin resistance. Most notably the oqxAB and mrkABCDF cassettes were contained within two composite transposons (Tn6010 and Tn6011) that seemed to originate from Klebsiella pneumoniae, thus demonstrating the capability of IncX1 plasmids of facilitating lateral transfer of gene cassettes between different Enterobacteriaceae.
对大型接合型多药耐药(MDR)质粒pOLA52进行了测序和注释。该质粒编码两种通常与机会性病原体染色体相关的表型,即通过耐药-结瘤-分裂(RND)型外排泵(oqxAB)产生的多药耐药性,以及3型菌毛(mrkABCDF)的形成。发现该质粒长度为51,602 bp,有68个推定基因。该质粒约一半构成一个保守的IncX1型主干,具有预测的接合、复制和分配区域,以及一个毒素/抗毒素(TA)质粒成瘾系统。通过不相容性测试,该质粒也被归类为IncX1。因此,pOLA52的接合转移和质粒维持区域似乎代表了特征明确的IncX2质粒R6K的IncX1直系同源物。在GenBank中的序列同源性搜索还表明,IncX1组质粒的流行率比IncX2高得多。pOLA52的21 kb“遗传负荷”区域显示由一个镶嵌体组成,其中包括一个编码氨苄青霉素抗性的片段化Tn3转座子。最值得注意的是,oqxAB和mrkABCDF盒式结构包含在两个复合转座子(Tn6010和Tn6011)中,这两个转座子似乎起源于肺炎克雷伯菌,从而证明了IncX1质粒促进基因盒式结构在不同肠杆菌科之间横向转移的能力。