Gencic Simonida, Grahame David A
Department of Biochemistry and Molecular Biology, Uniformed Services University of the Health Sciences, Bethesda, Maryland 20814-4799, USA.
Biochemistry. 2008 May 20;47(20):5544-55. doi: 10.1021/bi7024035. Epub 2008 Apr 29.
Acetyl-CoA decarbonylase/synthase (ACDS) is a multienzyme complex found in methanogens and certain other Archaea that carries out the overall synthesis and cleavage of the acetyl C-C and C-S bonds of acetyl-CoA. The reaction is involved both in the autotrophic fixation of carbon and in the process of methanogenesis from acetate, and takes place at a unique active site metal center known as the A cluster, located on the beta subunit of the ACDS complex and composed of a binuclear Ni-Ni site bridged by a cysteine thiolate to an Fe4S4 center. In this work, a high rate of acetyl-CoA synthesis was achieved with the recombinant ACDS beta subunit by use of methylcobinamide as an appropriate mimic of the physiological base-off corrinoid substrate. The redox dependence of acetyl-CoA synthesis exhibited one-electron Nernst behavior, and the effects of pH on the observed midpoint potential indicated that reductive activation of the A cluster also involves protonation. Initial burst kinetic studies indicated the formation of stoichiometric amounts of an A cluster-acetyl adduct, further supported by direct chromatographic isolation of an active enzyme-acetyl species. Titration experiments indicated that two electrons are required for activation of the enzyme in the process of forming the enzyme-acetyl intermediate. The results also established that the A cluster-acetyl species undergoes reductive elimination of the acetyl group with the simultaneous release of two, low potential electron equivalents. Thus, the one-electron Nernst behavior can be interpreted as the sum of two separate, low potential, one-electron steps. The results tend to exclude reaction mechanisms involving either one- or three-electron reduced forms of the A cluster as immediate precursors to the acetyl species. A scheme involving a [Fe4S4]1+-Ni1+ species is favored over a [Fe4S4]2+-Ni0 form. The role of proton uptake in the possible formation of a Ni2+-hydride intermediate is also discussed. Trapping of electrons during the formation of the A cluster-acetyl species from substrates CO and methylcobinamide was found to be highly favorable, thus presenting a means for extensive activation of the enzyme under otherwise nonpermissive physiological redox potentials.
乙酰辅酶A脱羧酶/合酶(ACDS)是一种存在于产甲烷菌和某些其他古菌中的多酶复合体,它负责乙酰辅酶A中乙酰基的C-C键和C-S键的整体合成与裂解。该反应既参与碳的自养固定,也参与从乙酸盐生成甲烷的过程,并且发生在一个独特的活性位点金属中心,即A簇,它位于ACDS复合体的β亚基上,由一个通过半胱氨酸硫醇盐桥连到Fe4S4中心的双核Ni-Ni位点组成。在这项工作中,通过使用甲基钴胺素作为生理脱碱基类咕啉底物的合适模拟物,重组ACDSβ亚基实现了较高的乙酰辅酶A合成速率。乙酰辅酶A合成的氧化还原依赖性表现出单电子能斯特行为,pH对观察到的中点电位的影响表明A簇的还原激活也涉及质子化。初始爆发动力学研究表明形成了化学计量的A簇-乙酰加合物,活性酶-乙酰物种的直接色谱分离进一步支持了这一点。滴定实验表明,在形成酶-乙酰中间体的过程中,激活该酶需要两个电子。结果还表明,A簇-乙酰物种经历乙酰基的还原消除,同时释放两个低电位电子当量。因此,单电子能斯特行为可以解释为两个独立的、低电位的单电子步骤之和。结果倾向于排除涉及A簇的单电子或三电子还原形式作为乙酰物种直接前体的反应机制。涉及[Fe4S4]1+-Ni1+物种的方案比[Fe4S4]2+-Ni0形式更受青睐。还讨论了质子摄取在可能形成Ni2+-氢化物中间体中的作用。发现在从底物CO和甲基钴胺素形成A簇-乙酰物种的过程中捕获电子非常有利,从而提供了一种在其他情况下不允许的生理氧化还原电位下广泛激活该酶的方法。