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鸭肠炎病毒的UL31至UL35基因序列与其在单纯疱疹病毒1中的同源序列相对应。

The UL31 to UL35 gene sequences of Duck enteritis virus correspond to their homologs in herpes simplex virus 1.

作者信息

An R, Li H, Han Z, Shao Y, Liu S, Kong X

机构信息

Division of Avian Infectious Diseases, National Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Harbin 150001, PR China.

出版信息

Acta Virol. 2008;52(1):23-30.

PMID:18459832
Abstract

Five ORFs in the genome of Duck enteritis virus (DEV) corresponding to UL31, UL32, UL33, UL34, and UL35 genes of Herpes simplex virus 1 (HSV-1) were amplified by a modified "targeted gene walking" PCR, cloned, and sequenced. UL33, UL34, and UL35 genes were oriented from the left to the right of genome, while UL31 and UL32 had an opposite orientation. A comparison of deduced amino acid sequences of the DEV ORFs with their alphaherpesvirus homologs showed well-conserved regions except for the UL34 and UL35 genes. Phylogenetic analysis revealed that DEV was closer to the genus Mardivirus than to any other genus of the subfamily Alphaherpesvirinae. Based on this evidence, we proposed to assign DEV to the subfamily Alphaherpesvirinae.

摘要

通过改良的“靶向基因步移”PCR扩增、克隆并测序了鸭肠炎病毒(DEV)基因组中与单纯疱疹病毒1型(HSV-1)的UL31、UL32、UL33、UL34和UL35基因相对应的5个开放阅读框(ORF)。UL33、UL34和UL35基因在基因组中从左向右排列,而UL31和UL32的排列方向相反。DEV的ORF推导氨基酸序列与其α疱疹病毒同源物的比较显示,除了UL34和UL35基因外,存在保守区域。系统发育分析表明,DEV与马立克病毒属的亲缘关系比与α疱疹病毒亚科的任何其他属更近。基于这一证据,我们建议将DEV归入α疱疹病毒亚科。

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The UL31 to UL35 gene sequences of Duck enteritis virus correspond to their homologs in herpes simplex virus 1.鸭肠炎病毒的UL31至UL35基因序列与其在单纯疱疹病毒1中的同源序列相对应。
Acta Virol. 2008;52(1):23-30.
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引用本文的文献

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Different linkages in the long and short regions of the genomes of duck enteritis virus Clone-03 and VAC strains.鸭肠炎病毒 Clone-03 株和 VAC 株基因组长、短区的不同连接。
Virol J. 2011 May 2;8:200. doi: 10.1186/1743-422X-8-200.
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Transcription phase, protein characteristics of DEV UL45 and prokaryotic expression, antibody preparation of the UL45 des-transmembrane domain.
转录期、DEV UL45 的蛋白特性、原核表达、UL45 去跨膜结构域抗体的制备。
Virol J. 2010 Sep 16;7:232. doi: 10.1186/1743-422X-7-232.
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Identification of a novel linear B-cell epitope in the UL26 and UL26.5 proteins of Duck Enteritis Virus.鉴定鸭肠炎病毒 UL26 和 UL26.5 蛋白中的新型线性 B 细胞表位。
Virol J. 2010 Sep 13;7:223. doi: 10.1186/1743-422X-7-223.
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Cloning, expression and characterization of gE protein of duck plague virus.鸭瘟病毒 gE 蛋白的克隆、表达与鉴定。
Virol J. 2010 Jun 8;7:120. doi: 10.1186/1743-422X-7-120.