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一种用于双域方程数值解的高效技术。

An efficient technique for the numerical solution of the bidomain equations.

作者信息

Whiteley Jonathan P

机构信息

Oxford University Computing Laboratory, Wolfson Building, Parks Road, Oxford OX1 3QD, UK.

出版信息

Ann Biomed Eng. 2008 Aug;36(8):1398-408. doi: 10.1007/s10439-008-9513-0. Epub 2008 May 15.

Abstract

Computing the numerical solution of the bidomain equations is widely accepted to be a significant computational challenge. In this study we extend a previously published semi-implicit numerical scheme with good stability properties that has been used to solve the bidomain equations (Whiteley, J.P. IEEE Trans. Biomed. Eng. 53:2139-2147, 2006). A new, efficient numerical scheme is developed which utilizes the observation that the only component of the ionic current that must be calculated on a fine spatial mesh and updated frequently is the fast sodium current. Other components of the ionic current may be calculated on a coarser mesh and updated less frequently, and then interpolated onto the finer mesh. Use of this technique to calculate the transmembrane potential and extracellular potential induces very little error in the solution. For the simulations presented in this study an increase in computational efficiency of over two orders of magnitude over standard numerical techniques is obtained.

摘要

计算双域方程的数值解被广泛认为是一项重大的计算挑战。在本研究中,我们扩展了之前发表的具有良好稳定性的半隐式数值格式,该格式已被用于求解双域方程(怀特利,J.P.《IEEE生物医学工程汇刊》53:2139 - 2147,2006年)。我们开发了一种新的高效数值格式,该格式利用了这样一个观察结果:离子电流中唯一必须在精细空间网格上计算并频繁更新的分量是快速钠电流。离子电流的其他分量可以在较粗的网格上计算并较少频率地更新,然后插值到较精细的网格上。使用这种技术来计算跨膜电位和细胞外电位在解中引起的误差非常小。对于本研究中给出的模拟,与标准数值技术相比,计算效率提高了两个多数量级。

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