• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

嗜酸丛毛单胞菌主要孔蛋白的核苷酸及推导的氨基酸序列以及孔蛋白一级结构的比较

Nucleotide and derived amino acid sequences of the major porin of Comamonas acidovorans and comparison of porin primary structures.

作者信息

Gerbl-Rieger S, Peters J, Kellermann J, Lottspeich F, Baumeister W

机构信息

Max-Planck Institut für Biochemie, Martinsried bei München, Federal Republic of Germany.

出版信息

J Bacteriol. 1991 Apr;173(7):2196-205. doi: 10.1128/jb.173.7.2196-2205.1991.

DOI:10.1128/jb.173.7.2196-2205.1991
PMID:1848840
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC207767/
Abstract

The DNA sequence of the gene which codes for the major outer membrane porin (Omp32) of Comamonas acidovorans has been determined. The structural gene encodes a precursor consisting of 351 amino acid residues with a signal peptide of 19 amino acid residues. Comparisons with amino acid sequences of outer membrane proteins and porins from several other members of the class Proteobacteria and of the Chlamydia trachomatis porin and the Neurospora crassa mitochondrial porin revealed a motif of eight regions of local homology. The results of this analysis are discussed with regard to common structural features of porins.

摘要

编码嗜酸丛毛单胞菌主要外膜孔蛋白(Omp32)的基因的DNA序列已被测定。该结构基因编码一个由351个氨基酸残基组成的前体,带有一个19个氨基酸残基的信号肽。将其与变形菌门其他几个成员的外膜蛋白和孔蛋白的氨基酸序列、沙眼衣原体孔蛋白以及粗糙脉孢菌线粒体孔蛋白进行比较,发现了八个局部同源区域的基序。针对孔蛋白的共同结构特征对该分析结果进行了讨论。

相似文献

1
Nucleotide and derived amino acid sequences of the major porin of Comamonas acidovorans and comparison of porin primary structures.嗜酸丛毛单胞菌主要孔蛋白的核苷酸及推导的氨基酸序列以及孔蛋白一级结构的比较
J Bacteriol. 1991 Apr;173(7):2196-205. doi: 10.1128/jb.173.7.2196-2205.1991.
2
Topology of the anion-selective porin Omp32 from Comamonas acidovorans.嗜酸丛毛单胞菌阴离子选择性孔蛋白Omp32的拓扑结构
J Struct Biol. 1992 Jan-Feb;108(1):14-24. doi: 10.1016/1047-8477(92)90003-s.
3
Sequence and transcriptional start site of the Pseudomonas aeruginosa outer membrane porin protein F gene.铜绿假单胞菌外膜孔蛋白F基因的序列及转录起始位点
J Bacteriol. 1988 Jan;170(1):155-62. doi: 10.1128/jb.170.1.155-162.1988.
4
Crystal structure of Omp32, the anion-selective porin from Comamonas acidovorans, in complex with a periplasmic peptide at 2.1 A resolution.嗜酸丛毛单胞菌阴离子选择性孔蛋白Omp32与周质肽复合物的晶体结构,分辨率为2.1埃。
Structure. 2000 Sep 15;8(9):981-92. doi: 10.1016/s0969-2126(00)00189-1.
5
Porin from the halophilic species Ectothiorhodospira vacuolata: cloning, structure of the gene and comparison with other porins.
Gene. 1997 Jun 3;191(2):225-32. doi: 10.1016/s0378-1119(97)00065-6.
6
Cloning and nucleotide sequence of anaerobically induced porin protein E1 (OprE) of Pseudomonas aeruginosa PAO1.
Mol Microbiol. 1993 May;8(5):993-1004. doi: 10.1111/j.1365-2958.1993.tb01643.x.
7
Primary structure of the porin protein of Haemophilus influenzae type b determined by nucleotide sequence analysis.通过核苷酸序列分析确定的b型流感嗜血杆菌孔蛋白的一级结构。
Infect Immun. 1989 Apr;57(4):1100-7. doi: 10.1128/iai.57.4.1100-1107.1989.
8
The bacterial porin superfamily: sequence alignment and structure prediction.细菌孔蛋白超家族:序列比对与结构预测。
Mol Microbiol. 1991 Sep;5(9):2153-64. doi: 10.1111/j.1365-2958.1991.tb02145.x.
9
Porin protein of Neisseria gonorrhoeae: cloning and gene structure.淋病奈瑟菌孔蛋白:克隆与基因结构
Proc Natl Acad Sci U S A. 1987 Nov;84(22):8135-9. doi: 10.1073/pnas.84.22.8135.
10
Comparative analyses of Serratia spp. outer membrane porin proteins.
Can J Microbiol. 1993 Apr;39(4):442-7. doi: 10.1139/m93-064.

引用本文的文献

1
Low molecular weight proteins of outer membrane of Salmonella typhimurium are immunogenic in Salmonella induced reactive arthritis revealed by proteomics.蛋白质组学显示,鼠伤寒沙门氏菌外膜的低分子量蛋白质在沙门氏菌诱导的反应性关节炎中具有免疫原性。
Clin Exp Immunol. 2007 Jun;148(3):486-93. doi: 10.1111/j.1365-2249.2007.03362.x. Epub 2007 Mar 22.
2
Molecular basis of bacterial outer membrane permeability revisited.重新审视细菌外膜通透性的分子基础。
Microbiol Mol Biol Rev. 2003 Dec;67(4):593-656. doi: 10.1128/MMBR.67.4.593-656.2003.
3
The regulated outer membrane protein Omp21 from Comamonas acidovorans is identified as a member of a new family of eight-stranded beta-sheet proteins by its sequence and properties.嗜酸丛毛单胞菌的外膜调节蛋白Omp21通过其序列和特性被鉴定为一个由八链β-折叠蛋白组成的新家族的成员。
J Bacteriol. 1998 Aug;180(15):3741-9. doi: 10.1128/JB.180.15.3741-3749.1998.
4
Identification of homologs for thioredoxin, peptidyl prolyl cis-trans isomerase, and glycerophosphodiester phosphodiesterase in outer membrane fractions from Treponema pallidum, the syphilis spirochete.梅毒螺旋体(苍白密螺旋体)外膜组分中硫氧还蛋白、肽基脯氨酰顺反异构酶和甘油磷酸二酯磷酸二酯酶同源物的鉴定。
Infect Immun. 1997 Oct;65(10):4179-89. doi: 10.1128/iai.65.10.4179-4189.1997.
5
Identification of a Bordetella pertussis bvg-regulated porin-like protein.百日咳博德特氏菌bvg调控的孔蛋白样蛋白的鉴定
J Bacteriol. 1995 Feb;177(3):805-9. doi: 10.1128/jb.177.3.805-809.1995.
6
Antigenic determinants of the OmpC porin from Salmonella typhimurium.鼠伤寒沙门氏菌外膜孔蛋白OmpC的抗原决定簇
Infect Immun. 1995 Dec;63(12):4600-5. doi: 10.1128/iai.63.12.4600-4605.1995.
7
The major outer membrane protein of Acidovorax delafieldii is an anion-selective porin.德氏食酸菌的主要外膜蛋白是一种阴离子选择性孔蛋白。
J Bacteriol. 1991 Jul;173(13):4182-7. doi: 10.1128/jb.173.13.4182-4187.1991.
8
Nucleotide sequence of the protein D2 gene of Pseudomonas aeruginosa.铜绿假单胞菌蛋白质D2基因的核苷酸序列。
Antimicrob Agents Chemother. 1992 Aug;36(8):1791-3. doi: 10.1128/AAC.36.8.1791.
9
Isolation and cloning of Omp alpha, a coiled-coil protein spanning the periplasmic space of the ancestral eubacterium Thermotoga maritima.嗜热栖热菌(Thermotoga maritima)是一种古老的真细菌,其周质空间中存在一种卷曲螺旋蛋白Ompα的分离与克隆。
EMBO J. 1992 Dec;11(12):4369-78. doi: 10.1002/j.1460-2075.1992.tb05537.x.
10
Structural relatedness of enteric bacterial porins assessed with monoclonal antibodies to Salmonella typhimurium OmpD and OmpC.用抗鼠伤寒沙门氏菌OmpD和OmpC单克隆抗体评估肠道细菌孔蛋白的结构相关性。
J Bacteriol. 1992 Mar;174(6):1965-73. doi: 10.1128/jb.174.6.1965-1973.1992.

本文引用的文献

1
The ;heavy' subunit of the photosynthetic reaction centre from Rhodopseudomonas viridis: isolation of the gene, nucleotide and amino acid sequence.绿菌(Rhodopseudomonas viridis)光合作用反应中心的“重”亚基:基因、核苷酸和氨基酸序列的分离。
EMBO J. 1985 Jul;4(7):1667-72. doi: 10.1002/j.1460-2075.1985.tb03835.x.
2
Primary structure of major outer membrane protein II (ompA protein) of Escherichia coli K-12.大肠杆菌K-12主要外膜蛋白II(ompA蛋白)的一级结构
Proc Natl Acad Sci U S A. 1980 Aug;77(8):4592-6. doi: 10.1073/pnas.77.8.4592.
3
How signal sequences maintain cleavage specificity.信号序列如何维持切割特异性。
J Mol Biol. 1984 Feb 25;173(2):243-51. doi: 10.1016/0022-2836(84)90192-x.
4
Compilation of published signal sequences.已发表信号序列的汇编。
Nucleic Acids Res. 1984 Jul 11;12(13):5145-64. doi: 10.1093/nar/12.13.5145.
5
A computer algorithm for testing potential prokaryotic terminators.一种用于测试潜在原核生物终止子的计算机算法。
Nucleic Acids Res. 1984 May 25;12(10):4411-27. doi: 10.1093/nar/12.10.4411.
6
Amino acid sequence homology among the major outer membrane proteins of Escherichia coli.大肠杆菌主要外膜蛋白之间的氨基酸序列同源性。
Proc Natl Acad Sci U S A. 1984 Feb;81(4):1048-52. doi: 10.1073/pnas.81.4.1048.
7
Use of endoproteinase Lys-C from Lysobacter enzymogenes in protein sequence analysis.产酶溶杆菌来源的内肽酶Lys-C在蛋白质序列分析中的应用。
Anal Biochem. 1983 Oct 15;134(2):347-54. doi: 10.1016/0003-2697(83)90308-1.
8
A rapid alkaline extraction method for the isolation of plasmid DNA.一种用于分离质粒DNA的快速碱性提取方法。
Methods Enzymol. 1983;100:243-55. doi: 10.1016/0076-6879(83)00059-2.
9
A putative signal peptidase recognition site and sequence in eukaryotic and prokaryotic signal peptides.真核生物和原核生物信号肽中一个假定的信号肽酶识别位点及序列。
J Mol Biol. 1983 Jun 25;167(2):391-409. doi: 10.1016/s0022-2836(83)80341-6.
10
Studies on transformation of Escherichia coli with plasmids.大肠杆菌质粒转化的研究。
J Mol Biol. 1983 Jun 5;166(4):557-80. doi: 10.1016/s0022-2836(83)80284-8.