Godány Andrej, Vidová Barbora, Janecek Stefan
Institute of Molecular Biology, Slovak Academy of Sciences, Bratislava, Slovakia.
FEMS Microbiol Lett. 2008 Jul;284(1):84-91. doi: 10.1111/j.1574-6968.2008.01191.x. Epub 2008 May 19.
Glycoside hydrolase family 77 (GH77) contains prokaryotic amylomaltases and plant-disproportionating enzymes (both possessing the 4-alpha-glucanotransferase activity; EC 2.4.1.25). Together with GH13 and GH70, it forms the clan GH-H, known as the alpha-amylase family. Bioinformatics analysis revealed that the putative GH77 amylomaltase (MalQ) from the Lyme disease spirochaete Borrelia burgdorferi genome (BB0166) contains several amino acid substitutions in the positions that are important and conserved in all GH77 amylomaltases. The most important mutation concerned the functionally important arginine positioned two residues before the catalytic nucleophile that is replaced by lysine in B. burgdorferi MalQ. Similar remarkable substitutions were found in two other putative GH77 amylomaltases from related borreliae. In order to confirm the exclusive sequence features and to verify the eventual enzymatic activity, the malQ gene from B. burgdorferi was amplified using PCR. A c. 1.5-kb amplified DNA fragment was sequenced, cloned and expressed in Escherichia coli, and the resulting recombinant protein was preliminarily characterized for its activity towards glucose (G1) and a series of malto-oligosaccharides (G2-G7). This study confirmed that the remarkable substitution of the arginine really exists and the GH77 MalQ protein from B. burgdorferi is a functional amylomaltase because it is able to hydrolyse the malto-oligosaccharides as well as to form their longer transglycosylation products.
糖苷水解酶家族77(GH77)包含原核生物的淀粉麦芽糖酶和植物歧化酶(两者均具有4-α-葡聚糖转移酶活性;酶委员会编号2.4.1.25)。它与GH13和GH70一起,构成了GH-H家族,即α-淀粉酶家族。生物信息学分析表明,莱姆病螺旋体伯氏疏螺旋体基因组中的假定GH77淀粉麦芽糖酶(MalQ)(BB0166)在所有GH77淀粉麦芽糖酶中重要且保守的位置含有几个氨基酸取代。最重要的突变涉及在催化亲核试剂前两个残基处的功能重要的精氨酸,在伯氏疏螺旋体MalQ中被赖氨酸取代。在来自相关疏螺旋体的另外两个假定的GH77淀粉麦芽糖酶中也发现了类似的显著取代。为了确认独特的序列特征并验证最终的酶活性,使用聚合酶链反应(PCR)扩增了伯氏疏螺旋体的malQ基因。对约1.5 kb的扩增DNA片段进行测序、克隆并在大肠杆菌中表达,对所得重组蛋白针对葡萄糖(G1)和一系列麦芽寡糖(G2-G7)的活性进行了初步表征。这项研究证实精氨酸的显著取代确实存在,并且伯氏疏螺旋体的GH77 MalQ蛋白是一种功能性淀粉麦芽糖酶,因为它能够水解麦芽寡糖并形成其更长的转糖基化产物。