Ferguson Matthew L, Prasad Kondury, Boukari Hacene, Sackett Dan L, Krueger Susan, Lafer Eileen M, Nossal Ralph
Department of Physics, University of Maryland, College Park, Maryland, USA.
Biophys J. 2008 Aug;95(4):1945-55. doi: 10.1529/biophysj.107.126342. Epub 2008 May 23.
The clathrin triskelion, which is a three-legged pinwheel-shaped heteropolymer, is a major component in the protein coats of certain post-Golgi and endocytic vesicles. At low pH, or at physiological pH in the presence of assembly proteins, triskelia will self-assemble to form a closed clathrin cage, or "basket". Recent static light scattering and dynamic light scattering studies of triskelia in solution showed that an individual triskelion has an intrinsic pucker similar to, but differing from, that inferred from a high resolution cryoEM structure of a triskelion in a clathrin basket. We extend the earlier solution studies by performing small-angle neutron scattering (SANS) experiments on isolated triskelia, allowing us to examine a higher q range than that probed by static light scattering. Results of the SANS measurements are consistent with the light scattering measurements, but show a shoulder in the scattering function at intermediate q values (0.016 A(-1)), just beyond the Guinier regime. This feature can be accounted for by Brownian dynamics simulations based on flexible bead-spring models of a triskelion, which generate time-averaged scattering functions. Calculated scattering profiles are in good agreement with the experimental SANS profiles when the persistence length of the assumed semiflexible triskelion is close to that previously estimated from the analysis of electron micrographs.
网格蛋白三脚复合体是一种呈三腿风车形状的杂聚物,是某些高尔基体后和内吞小泡的蛋白质衣被中的主要成分。在低pH值下,或在有组装蛋白存在的生理pH值条件下,三脚复合体会自我组装形成一个封闭的网格蛋白笼,即“篮子”。最近对溶液中三脚复合体的静态光散射和动态光散射研究表明,单个三脚复合体具有一种内在的褶皱,与从网格蛋白篮中三脚复合体的高分辨率冷冻电镜结构推断出的褶皱相似但又不同。我们通过对分离出的三脚复合体进行小角中子散射(SANS)实验扩展了早期的溶液研究,这使我们能够研究比静态光散射所探测的更高的q范围。SANS测量结果与光散射测量结果一致,但在中间q值(0.016 Å⁻¹)处的散射函数中出现了一个肩峰,刚好超出了吉尼埃区。基于三脚复合体的柔性珠簧模型进行的布朗动力学模拟可以解释这一特征,该模拟生成了时间平均散射函数。当假设的半柔性三脚复合体的持久长度接近先前从电子显微镜照片分析中估计的值时,计算得到的散射轮廓与实验SANS轮廓吻合良好。