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犬血样中干血斑DNA提取方法的改进及检测吉氏巴贝斯虫(亚洲基因型)感染的四种PCR方法比较

Improvement of DNA extraction method for dried blood spots and comparison of four PCR methods for detection of Babesia gibsoni (Asian genotype) infection in canine blood samples.

作者信息

Tani Hiroyuki, Tada Yuji, Sasai Kazumi, Baba Eiichiroh

机构信息

Laboratory of Veterinary Internal Medicine, Department of Advanced Clinical Medicine, Graduate School of Life and Environmental Sciences, Osaka Prefecture University, Nakaku, Sakai, Osaka, Japan.

出版信息

J Vet Med Sci. 2008 May;70(5):461-7. doi: 10.1292/jvms.70.461.

DOI:10.1292/jvms.70.461
PMID:18525167
Abstract

To eradicate canine babesiosis in epidemic areas, mass-screening of the infection situation of Babesia gibsoni including occult infection is necessary. The development of cost-effective method for storage and transport of blood samples is required. A highly efficient DNA extraction procedure from dried blood spots (DBS) onto Whatman 3MM filter paper was developed for the diagnosis of B. gibsoni infection in dog by PCR. In 3 extraction methods, Chelex-based method in combination with saponin washing and phenol-chloroform-isoamyl alcohol extraction (Saponin-PCI method) provided the best results. Sensitivity of the 4 previously described PCR methods for detection of B. gibsoni infection was also compared using serially diluted blood samples of B. gibsoni-infected dogs. The PCR method using Gib599F/Gib1270R primer pair provided the best performance. To evaluate the stability of DNA in DBS, DBS of B. gibsoni-infected dogs stored at room temperature for 2 months. The stability was superior to whole blood samples stored at -20 degrees C for 2 months. This highly efficient DNA extraction method on DBS using Whatman 3MM filter paper has potential to be cost-effective and high performance tool for storage, and molecular diagnosis of clinical blood sample from dog. This procedure in combination with the PCR method using Gib599F/Gib1270R primer pair may greatly assist in diagnosis of B. gibsoni infection in dog populations that are geographically distant.

摘要

为根除流行地区的犬巴贝斯虫病,有必要对吉氏巴贝斯虫的感染情况进行大规模筛查,包括隐匿感染。需要开发一种经济高效的血液样本储存和运输方法。为通过聚合酶链反应(PCR)诊断犬的吉氏巴贝斯虫感染,开发了一种从Whatman 3MM滤纸上的干血斑(DBS)中高效提取DNA的程序。在3种提取方法中,基于Chelex的方法与皂苷洗涤和酚-氯仿-异戊醇提取相结合(皂苷-PCI方法)效果最佳。还使用吉氏巴贝斯虫感染犬的系列稀释血液样本比较了先前描述的4种检测吉氏巴贝斯虫感染的PCR方法的灵敏度。使用Gib599F/Gib1270R引物对的PCR方法性能最佳。为评估DBS中DNA的稳定性,将吉氏巴贝斯虫感染犬的DBS在室温下储存2个月。其稳定性优于在-20℃下储存2个月的全血样本。这种使用Whatman 3MM滤纸对DBS进行高效DNA提取的方法有可能成为一种经济高效且高性能的犬临床血液样本储存和分子诊断工具。该程序与使用Gib599F/Gib1270R引物对的PCR方法相结合,可能极大地有助于诊断地理上相距遥远的犬群中的吉氏巴贝斯虫感染。

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