Duc Laurence, Noll Matthias, Meier Brigitte E, Bürgmann Helmut, Zeyer Josef
Environmental Microbiology, Institute of Biogeochemistry and Pollutant Dynamics, Swiss Federal Institute of Technology (ETH) Zürich, Zürich, Switzerland.
Microb Ecol. 2009 Jan;57(1):179-90. doi: 10.1007/s00248-008-9408-5. Epub 2008 Jun 18.
Forefields of receding glaciers are unique and sensitive environments representing natural chronosequences. In such habitats, microbial nitrogen fixation is of particular interest since the low concentration of bioavailable nitrogen is one of the key limitations for growth of plants and soil microorganisms. Asymbiotic nitrogen fixation in the Damma glacier (Swiss Central Alps) forefield soils was assessed using the acetylene reduction assay. Free-living diazotrophic diversity and population structure were resolved by assembling four NifH sequence libraries for bulk and rhizosphere soils at two soil age classes (8- and 70-year ice-free forefield). A total of 318 NifH sequences were analyzed and grouped into 45 unique phylotypes. Phylogenetic analyses revealed a higher diversity as well as a broader distribution of NifH sequences among phylogenetic clusters than formerly observed in other environments. This illustrates the importance of free-living diazotrophs and their potential contribution to the global nitrogen input in this nutrient-poor environment. NifH diversity in bulk soils was higher than in rhizosphere soils. Moreover, the four libraries displayed low similarity values. This indicated that both soil age and the presence of pioneer plants influence diversification and population structure of free-living diazotrophs.
退缩冰川的前缘地带是独特且敏感的环境,代表着自然时间序列。在这类生境中,微生物固氮尤其引人关注,因为生物可利用氮的低浓度是植物和土壤微生物生长的关键限制因素之一。利用乙炔还原法评估了瑞士中部阿尔卑斯山区达马冰川前缘地带土壤中的非共生固氮作用。通过构建两个土壤年龄类别(8年和70年无冰前缘地带)的块状土壤和根际土壤的四个nifH序列文库,解析了自由生活的固氮营养多样性和种群结构。共分析了318个nifH序列,并将其分为45个独特的系统型。系统发育分析表明,与之前在其他环境中观察到的情况相比,nifH序列在系统发育簇中的多样性更高,分布也更广。这说明了自由生活的固氮菌的重要性及其在这种营养贫瘠环境中对全球氮输入的潜在贡献。块状土壤中的nifH多样性高于根际土壤。此外,这四个文库显示出较低的相似性值。这表明土壤年龄和先锋植物的存在都会影响自由生活的固氮菌的多样化和种群结构。