• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

赞数组。

In praise of arrays.

作者信息

Ying Lihua, Sarwal Minnie

机构信息

Department of Pediatrics, Stanford University, 300 Pasteur Drive, Stanford, CA 94305, USA.

出版信息

Pediatr Nephrol. 2009 Sep;24(9):1643-59; quiz 1655, 1659. doi: 10.1007/s00467-008-0808-z. Epub 2008 Jun 21.

DOI:10.1007/s00467-008-0808-z
PMID:18568367
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2719727/
Abstract

Microarray technologies have both fascinated and frustrated the transplant community since their introduction roughly a decade ago. Fascination arose from the possibility offered by the technology to gain a profound insight into the cellular response to immunogenic injury and the potential that this genomic signature would be indicative of the biological mechanism by which that stress was induced. Frustrations have arisen primarily from technical factors such as data variance, the requirement for the application of advanced statistical and mathematical analyses, and difficulties associated with actually recognizing signature gene-expression patterns and discerning mechanisms. To aid the understanding of this powerful tool, its versatility, and how it is dramatically changing the molecular approach to biomedical and clinical research, this teaching review describes the technology and its applications, as well as the limitations and evolution of microarrays, in the field of organ transplantation. Finally, it calls upon the attention of the transplant community to integrate into multidisciplinary teams, to take advantage of this technology and its expanding applications in unraveling the complex injury circuits that currently limit transplant survival.

摘要

大约十年前微阵列技术问世以来,它既让移植界为之着迷,又让其感到沮丧。着迷源于该技术提供了深入了解细胞对免疫原性损伤反应的可能性,以及这种基因组特征可能指示诱导该应激的生物学机制的潜力。沮丧主要源于技术因素,如数据差异、应用先进统计和数学分析的要求,以及实际识别特征基因表达模式和辨别机制的困难。为了帮助理解这个强大的工具、它的多功能性以及它如何极大地改变生物医学和临床研究的分子方法,这篇教学综述描述了该技术及其应用,以及微阵列在器官移植领域的局限性和发展。最后,它呼吁移植界融入多学科团队,利用这项技术及其不断扩展的应用来揭示目前限制移植存活的复杂损伤通路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9b4/2719727/d402a8d5d552/467_2008_808_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9b4/2719727/19c144251f55/467_2008_808_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9b4/2719727/9e56b5c38a3c/467_2008_808_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9b4/2719727/d402a8d5d552/467_2008_808_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9b4/2719727/19c144251f55/467_2008_808_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9b4/2719727/9e56b5c38a3c/467_2008_808_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9b4/2719727/d402a8d5d552/467_2008_808_Fig3_HTML.jpg

相似文献

1
In praise of arrays.赞数组。
Pediatr Nephrol. 2009 Sep;24(9):1643-59; quiz 1655, 1659. doi: 10.1007/s00467-008-0808-z. Epub 2008 Jun 21.
2
Novel and future applications of microarrays in toxicological research.微阵列在毒理学研究中的新应用及未来应用
Expert Opin Drug Metab Toxicol. 2007 Aug;3(4):599-608. doi: 10.1517/17425225.3.4.599.
3
Microarrays: interrogating the transplant transcriptosome.微阵列:探究移植转录组
Clin Transpl. 2004:261-7.
4
DNA microarrays: a powerful genomic tool for biomedical and clinical research.DNA微阵列:用于生物医学和临床研究的强大基因组工具。
Mol Med. 2007 Sep-Oct;13(9-10):527-41. doi: 10.2119/2006-00107.Trevino.
5
Microarrays: a monitoring tool for transplant patients?微阵列:移植患者的监测工具?
Transpl Int. 2006 Oct;19(10):775-88. doi: 10.1111/j.1432-2277.2006.00349.x.
6
Microarrays: new tools for transplantation research.微阵列:移植研究的新工具。
Pediatr Nephrol. 2003 Apr;18(4):319-27. doi: 10.1007/s00467-003-1083-7. Epub 2003 Mar 18.
7
Molecular heterogeneity in acute renal allograft rejection and DNA microarrays.
N Engl J Med. 2003 Dec 4;349(23):2269. doi: 10.1056/NEJM200312043492320.
8
Array-based methods for diagnosis and prevention of transplant rejection.基于阵列的移植排斥诊断和预防方法。
Expert Rev Mol Diagn. 2006 Mar;6(2):165-78. doi: 10.1586/14737159.6.2.165.
9
Novel insights into lung transplant rejection by microarray analysis.通过微阵列分析对肺移植排斥反应的新见解。
Proc Am Thorac Soc. 2007 Jan;4(1):44-51. doi: 10.1513/pats.200605-110JG.
10
Use of DNA arrays/microarrays in pancreatic research.DNA 阵列/微阵列在胰腺研究中的应用。
Pancreatology. 2001;1(6):581-6. doi: 10.1159/000055867.

引用本文的文献

1
DExplore: An Online Tool for Detecting Differentially Expressed Genes from mRNA Microarray Experiments.DExplore:一种用于从mRNA微阵列实验中检测差异表达基因的在线工具。
Biology (Basel). 2024 May 16;13(5):351. doi: 10.3390/biology13050351.
2
Moving Biomarkers toward Clinical Implementation in Kidney Transplantation.推动生物标志物在肾移植临床中的应用。
J Am Soc Nephrol. 2017 Mar;28(3):735-747. doi: 10.1681/ASN.2016080858. Epub 2017 Jan 6.
3
The Use of Genomics and Pathway Analysis in Our Understanding and Prediction of Clinical Renal Transplant Injury.

本文引用的文献

1
AILUN: reannotating gene expression data automatically.AILUN:自动重新注释基因表达数据。
Nat Methods. 2007 Nov;4(11):879. doi: 10.1038/nmeth1107-879.
2
Interference of globin genes with biomarker discovery for allograft rejection in peripheral blood samples.珠蛋白基因对外周血样本中同种异体移植排斥生物标志物发现的干扰。
Physiol Genomics. 2008 Jan 17;32(2):190-7. doi: 10.1152/physiolgenomics.00216.2007. Epub 2007 Oct 30.
3
Identification of a peripheral blood transcriptional biomarker panel associated with operational renal allograft tolerance.
基因组学和通路分析在我们对临床肾移植损伤的理解与预测中的应用
Transplantation. 2016 Jul;100(7):1405-14. doi: 10.1097/TP.0000000000000943.
4
Intronic locus determines SHROOM3 expression and potentiates renal allograft fibrosis.内含子位点决定SHROOM3表达并增强肾移植纤维化。
J Clin Invest. 2015 Jan;125(1):208-21. doi: 10.1172/JCI76902. Epub 2014 Dec 1.
5
Molecular analysis of transplant rejection: marching onward.移植排斥的分子分析:不断前进。
J Exp Med. 2013 Oct 21;210(11):2147-9. doi: 10.1084/jem.20131810.
6
Estimating relative noise to signal in DNA microarray data.估算DNA微阵列数据中的相对噪声与信号
Int J Bioinform Res Appl. 2013;9(5):433-48. doi: 10.1504/IJBRA.2013.056085.
7
Biomarkers in solid organ transplantation: establishing personalized transplantation medicine.实体器官移植中的生物标志物:建立个体化移植医学。
Genome Med. 2011 Jun 8;3(6):37. doi: 10.1186/gm253.
8
Mechanism of cellular rejection in transplantation.移植中的细胞排斥机制。
Pediatr Nephrol. 2010 Jan;25(1):61-74. doi: 10.1007/s00467-008-1020-x.
9
Identifying biomarkers as diagnostic tools in kidney transplantation.鉴定生物标志物作为肾移植中的诊断工具。
Expert Rev Mol Diagn. 2011 Mar;11(2):183-96. doi: 10.1586/erm.10.119.
10
Assessment of kidney organ quality and prediction of outcome at time of transplantation.评估肾脏器官质量和预测移植时的预后。
Semin Immunopathol. 2011 Mar;33(2):185-99. doi: 10.1007/s00281-011-0248-x. Epub 2011 Jan 28.
与肾移植术后操作性免疫耐受相关的外周血转录生物标志物 panel 的鉴定
Proc Natl Acad Sci U S A. 2007 Sep 25;104(39):15448-53. doi: 10.1073/pnas.0705834104. Epub 2007 Sep 14.
4
Transplant reno-vascular stenoses associated with early erythropoietin use.
Clin Transplant. 2007 Sep-Oct;21(5):597-608. doi: 10.1111/j.1399-0012.2007.00694.x.
5
Antibody-mediated rejection in renal allografts: lessons from pathology.肾移植中抗体介导的排斥反应:病理学的经验教训。
Clin J Am Soc Nephrol. 2006 May;1(3):415-20. doi: 10.2215/CJN.01881105. Epub 2006 Mar 8.
6
Mechanisms and role of HLA and non-HLA alloantibodies.HLA和非HLA同种抗体的机制及作用
Clin J Am Soc Nephrol. 2006 May;1(3):404-14. doi: 10.2215/CJN.00270106. Epub 2006 Apr 19.
7
The role of interleukin-18 in renal injury.白细胞介素-18在肾损伤中的作用。
J Surg Res. 2008 Mar;145(1):170-5. doi: 10.1016/j.jss.2007.03.037. Epub 2007 Jul 23.
8
Comparing microarray studies.比较微阵列研究。
Methods Mol Biol. 2007;377:139-52. doi: 10.1007/978-1-59745-390-5_8.
9
Molecular evidence of injury and inflammation in normal and fibrotic renal allografts one year posttransplant.移植后一年正常及纤维化同种异体肾移植中损伤和炎症的分子证据。
Transplantation. 2007 Jun 15;83(11):1466-76. doi: 10.1097/01.tp.0000265501.33362.d3.
10
MicroRNA expression signature and antisense-mediated depletion reveal an essential role of MicroRNA in vascular neointimal lesion formation.微小RNA表达特征及反义介导的去除揭示了微小RNA在血管内膜损伤形成中的重要作用。
Circ Res. 2007 Jun 8;100(11):1579-88. doi: 10.1161/CIRCRESAHA.106.141986. Epub 2007 May 3.