Leng Wenchuan, Liu Tao, Li Rui, Yang Jian, Wei Candong, Zhang Wenliang, Jin Qi
State Key Laboratory for Molecular Virology and Genetic Engineering, Institute of Pathogen Biology, Chinese Academy of Medical Sciences, Beijing 100730, PR China.
BMC Genomics. 2008 Jun 25;9:303. doi: 10.1186/1471-2164-9-303.
Trichophyton rubrum is the most common dermatophyte causing fungal skin infections in humans. Asexual sporulation is an important means of propagation for T. rubrum, and conidia produced by this way are thought to be the primary cause of human infections. Despite their importance in pathogenesis, the conidia of T. rubrum remain understudied. We intend to intensively investigate the proteome of dormant T. rubrum conidia to characterize its molecular and cellular features and to enhance the development of novel therapeutic strategies.
The proteome of T. rubrum conidia was analyzed by combining shotgun proteomics with sample prefractionation and multiple enzyme digestion. In total, 1026 proteins were identified. All identified proteins were compared to those in the NCBI non-redundant protein database, the eukaryotic orthologous groups database, and the gene ontology database to obtain functional annotation information. Functional classification revealed that the identified proteins covered nearly all major biological processes. Some proteins were spore specific and related to the survival and dispersal of T. rubrum conidia, and many proteins were important to conidial germination and response to environmental conditions.
Our results suggest that the proteome of T. rubrum conidia is considerably complex, and that the maintenance of conidial dormancy is an intricate and elaborate process. This data set provides the first global framework for the dormant T. rubrum conidia proteome and is a stepping stone on the way to further study of the molecular mechanisms of T. rubrum conidial germination and the maintenance of conidial dormancy.
红色毛癣菌是引起人类皮肤真菌感染最常见的皮肤癣菌。无性孢子形成是红色毛癣菌重要的繁殖方式,通过这种方式产生的分生孢子被认为是人类感染的主要原因。尽管分生孢子在发病机制中很重要,但对红色毛癣菌分生孢子的研究仍然不足。我们打算深入研究休眠的红色毛癣菌分生孢子的蛋白质组,以表征其分子和细胞特征,并促进新型治疗策略的开发。
通过将鸟枪法蛋白质组学与样品预分级和多种酶消化相结合,对红色毛癣菌分生孢子的蛋白质组进行了分析。总共鉴定出1026种蛋白质。将所有鉴定出的蛋白质与NCBI非冗余蛋白质数据库、真核直系同源组数据库和基因本体数据库中的蛋白质进行比较,以获得功能注释信息。功能分类显示,鉴定出的蛋白质几乎涵盖了所有主要的生物学过程。一些蛋白质是孢子特异性的,与红色毛癣菌分生孢子的存活和传播有关,许多蛋白质对分生孢子萌发和对环境条件的反应很重要。
我们的结果表明,红色毛癣菌分生孢子的蛋白质组相当复杂,分生孢子休眠的维持是一个复杂而精细的过程。该数据集为休眠的红色毛癣菌分生孢子蛋白质组提供了第一个全局框架,是进一步研究红色毛癣菌分生孢子萌发分子机制和分生孢子休眠维持的垫脚石。