• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

蛋白质功能的飞跃:单个突变如何逆转转录调节因子TetR的功能。

A protein functional leap: how a single mutation reverses the function of the transcription regulator TetR.

作者信息

Resch Marcus, Striegl Harald, Henssler Eva Maria, Sevvana Madhumati, Egerer-Sieber Claudia, Schiltz Emile, Hillen Wolfgang, Muller Yves A

机构信息

Lehrstuhl für Biotechnik, Department of Biology, Friedrich-Alexander University Erlangen-Nuremberg, Henkestrasse 91 and Staudtstrasse 5, D-91052 Erlangen, Germany.

出版信息

Nucleic Acids Res. 2008 Aug;36(13):4390-401. doi: 10.1093/nar/gkn400. Epub 2008 Jun 28.

DOI:10.1093/nar/gkn400
PMID:18587152
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2490752/
Abstract

Today's proteome is the result of innumerous gene duplication, mutagenesis, drift and selection processes. Whereas random mutagenesis introduces predominantly only gradual changes in protein function, a case can be made that an abrupt switch in function caused by single amino acid substitutions will not only considerably further evolution but might constitute a prerequisite for the appearance of novel functionalities for which no promiscuous protein intermediates can be envisaged. Recently, tetracycline repressor (TetR) variants were identified in which binding of tetracycline triggers the repressor to associate with and not to dissociate from the operator DNA as in wild-type TetR. We investigated the origin of this activity reversal by limited proteolysis, CD spectroscopy and X-ray crystallography. We show that the TetR mutant Leu17Gly switches its function via a disorder-order mechanism that differs completely from the allosteric mechanism of wild-type TetR. Our study emphasizes how single point mutations can engender unexpected leaps in protein function thus enabling the appearance of new functionalities in proteins without the need for promiscuous intermediates.

摘要

如今的蛋白质组是无数基因复制、诱变、漂变和选择过程的结果。随机诱变主要只会在蛋白质功能上引入渐进性变化,然而,可以提出这样一种观点,即由单个氨基酸取代导致的功能突然转变不仅会极大地推动进一步进化,而且可能是出现新功能的先决条件,而对于这些新功能,无法设想存在混杂的蛋白质中间体。最近,人们鉴定出了四环素阻遏物(TetR)变体,其中四环素的结合会触发阻遏物与操纵子DNA结合,而不像野生型TetR那样从操纵子DNA上解离。我们通过有限蛋白酶解、圆二色光谱和X射线晶体学研究了这种活性逆转的起源。我们表明,TetR突变体Leu17Gly通过一种无序-有序机制切换其功能,该机制与野生型TetR的变构机制完全不同。我们的研究强调了单点突变如何能够在蛋白质功能上产生意想不到的飞跃,从而使蛋白质在无需混杂中间体的情况下出现新功能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6e2/2490752/1e1e193d6ffe/gkn400f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6e2/2490752/de5463c2552b/gkn400f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6e2/2490752/c5d2b1d1132b/gkn400f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6e2/2490752/6f6dc6ee74a3/gkn400f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6e2/2490752/bb599c25aef6/gkn400f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6e2/2490752/037f9ea5749c/gkn400f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6e2/2490752/1e1e193d6ffe/gkn400f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6e2/2490752/de5463c2552b/gkn400f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6e2/2490752/c5d2b1d1132b/gkn400f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6e2/2490752/6f6dc6ee74a3/gkn400f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6e2/2490752/bb599c25aef6/gkn400f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6e2/2490752/037f9ea5749c/gkn400f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6e2/2490752/1e1e193d6ffe/gkn400f6.jpg

相似文献

1
A protein functional leap: how a single mutation reverses the function of the transcription regulator TetR.蛋白质功能的飞跃:单个突变如何逆转转录调节因子TetR的功能。
Nucleic Acids Res. 2008 Aug;36(13):4390-401. doi: 10.1093/nar/gkn400. Epub 2008 Jun 28.
2
Tet repressor induction by tetracycline: a molecular dynamics, continuum electrostatics, and crystallographic study.四环素诱导的 Tet 阻遏物:分子动力学、连续介质静电学及晶体学研究
J Mol Biol. 2008 May 9;378(4):898-912. doi: 10.1016/j.jmb.2008.03.022. Epub 2008 Mar 19.
3
Engineered Tet repressors with recognition specificity for the tetO-4C5G operator variant.对tetO-4C5G操纵子变体具有识别特异性的工程化四环素阻遏物。
Gene. 2007 Dec 1;404(1-2):93-100. doi: 10.1016/j.gene.2007.09.002. Epub 2007 Sep 12.
4
Structural basis of gene regulation by the tetracycline inducible Tet repressor-operator system.四环素诱导型 Tet 阻遏物 - 操纵子系统对基因调控的结构基础。
Nat Struct Biol. 2000 Mar;7(3):215-9. doi: 10.1038/73324.
5
Modular organisation of inducer recognition and allostery in the tetracycline repressor.四环素阻遏物中诱导物识别与变构的模块化组织
FEBS J. 2016 Jun;283(11):2102-14. doi: 10.1111/febs.13723. Epub 2016 Apr 20.
6
The induction of folding cooperativity by ligand binding drives the allosteric response of tetracycline repressor.配体结合诱导折叠协同性驱动四环素阻遏物的变构反应。
Proc Natl Acad Sci U S A. 2009 Dec 29;106(52):22263-8. doi: 10.1073/pnas.0911566106. Epub 2009 Dec 22.
7
Tetracycline repressor allostery does not depend on divalent metal recognition.四环素阻遏物的变构作用不依赖于二价金属识别。
Biochemistry. 2014 Dec 23;53(50):7990-8. doi: 10.1021/bi5012805. Epub 2014 Dec 9.
8
Crystal structure of the tet repressor in complex with a novel tetracycline, 9-(N,N-dimethylglycylamido)- 6-demethyl-6-deoxy-tetracycline.与新型四环素9-(N,N-二甲基甘氨酰胺基)-6-去甲基-6-脱氧四环素结合的四环素阻遏物的晶体结构。
J Mol Biol. 1999 Jan 15;285(2):455-61. doi: 10.1006/jmbi.1998.2290.
9
Tet repressor mutants with altered effector binding and allostery.具有改变的效应物结合和变构作用的四环素阻遏物突变体。
FEBS J. 2005 Sep;272(17):4487-96. doi: 10.1111/j.1742-4658.2005.04868.x.
10
Teaching TetR to recognize a new inducer.教导四环素阻遏蛋白识别一种新的诱导剂。
J Mol Biol. 2003 May 30;329(2):217-27. doi: 10.1016/s0022-2836(03)00427-3.

引用本文的文献

1
T7 RNA polymerase-based gene expression from a transcriptionally silent rDNA spacer in the endosymbiont-harboring trypanosomatid Angomonas deanei.基于T7 RNA聚合酶的基因表达,来自携带内共生体的锥虫Angomonas deanei中转录沉默的核糖体DNA间隔区。
PLoS One. 2025 May 30;20(5):e0322611. doi: 10.1371/journal.pone.0322611. eCollection 2025.
2
Rational design of small-molecule responsive protein switches.小分子响应型蛋白质开关的合理设计。
Protein Sci. 2023 Oct;32(10):e4774. doi: 10.1002/pro.4774.
3
Crystal structures of free and ligand-bound forms of the TetR/AcrR-like regulator SCO3201 from Streptomyces coelicolor suggest a novel allosteric mechanism.

本文引用的文献

1
Ohno's dilemma: evolution of new genes under continuous selection.大野的困境:持续选择下新基因的进化
Proc Natl Acad Sci U S A. 2007 Oct 23;104(43):17004-9. doi: 10.1073/pnas.0707158104. Epub 2007 Oct 17.
2
Crystal structure of an ancient protein: evolution by conformational epistasis.一种古老蛋白质的晶体结构:通过构象上位性进行的进化
Science. 2007 Sep 14;317(5844):1544-8. doi: 10.1126/science.1142819. Epub 2007 Aug 16.
3
How an agonist peptide mimics the antibiotic tetracycline to induce Tet-repressor.一种激动剂肽如何模拟抗生素四环素以诱导四环素阻遏物。
链霉菌 SCO3201 中 TetR/AcrR 样调控蛋白的自由态和配体结合态的晶体结构揭示了一种全新的变构机制。
FEBS J. 2023 Jan;290(2):521-532. doi: 10.1111/febs.16606. Epub 2022 Sep 2.
4
NO-Stressed Has Decreased Cell Division Rates in the Mouse Spleen.无应激减少了小鼠脾脏中的细胞分裂率。
Infect Immun. 2022 Aug 18;90(8):e0016722. doi: 10.1128/iai.00167-22. Epub 2022 Jul 11.
5
Status quo of tet regulation in bacteria.细菌中 tet 调节的现状。
Microb Biotechnol. 2022 Apr;15(4):1101-1119. doi: 10.1111/1751-7915.13926. Epub 2021 Oct 29.
6
Evolving origin-of-transfer sequences on staphylococcal conjugative and mobilizable plasmids-who's mimicking whom?葡萄球菌接合型和可移动质粒中转座序列的起源演变——谁在模仿谁?
Nucleic Acids Res. 2021 May 21;49(9):5177-5188. doi: 10.1093/nar/gkab303.
7
Robust and flexible platform for directed evolution of yeast genetic switches.用于酵母遗传开关定向进化的稳健且灵活的平台。
Nat Commun. 2021 Mar 23;12(1):1846. doi: 10.1038/s41467-021-22134-y.
8
Transcription Factors as Evolvable Biosensors.作为可进化生物传感器的转录因子。
Anal Sci. 2021 May 10;37(5):699-703. doi: 10.2116/analsci.20SCR12. Epub 2021 Jan 22.
9
The complex formed between a synthetic RNA aptamer and the transcription repressor TetR is a structural and functional twin of the operator DNA-TetR regulator complex.合成 RNA 适体与转录阻遏物 TetR 形成的复合物是操纵子 DNA-TetR 调节复合物的结构和功能上的孪生体。
Nucleic Acids Res. 2020 Apr 6;48(6):3366-3378. doi: 10.1093/nar/gkaa083.
10
The crystal structure of AcrR from Mycobacterium tuberculosis reveals a one-component transcriptional regulation mechanism.结核分枝杆菌AcrR的晶体结构揭示了一种单组分转录调控机制。
FEBS Open Bio. 2019 Oct;9(10):1713-1725. doi: 10.1002/2211-5463.12710. Epub 2019 Aug 20.
J Mol Biol. 2007 May 4;368(3):780-90. doi: 10.1016/j.jmb.2007.02.030. Epub 2007 Feb 22.
4
Two-way interdomain signal transduction in tetracycline repressor.四环素阻遏物中的双向域间信号转导
J Mol Biol. 2006 Aug 11;361(2):382-9. doi: 10.1016/j.jmb.2006.06.035. Epub 2006 Jun 30.
5
Optimal description of a protein structure in terms of multiple groups undergoing TLS motion.基于经历TLS运动的多个基团对蛋白质结构进行的最优描述。
Acta Crystallogr D Biol Crystallogr. 2006 Apr;62(Pt 4):439-50. doi: 10.1107/S0907444906005270. Epub 2006 Mar 18.
6
Tet repressor mutants with altered effector binding and allostery.具有改变的效应物结合和变构作用的四环素阻遏物突变体。
FEBS J. 2005 Sep;272(17):4487-96. doi: 10.1111/j.1742-4658.2005.04868.x.
7
A molecular viewer for the analysis of TLS rigid-body motion in macromolecules.一种用于分析大分子中TLS刚体运动的分子查看器。
Acta Crystallogr D Biol Crystallogr. 2005 Apr;61(Pt 4):465-71. doi: 10.1107/S0907444905001897. Epub 2005 Mar 24.
8
Likelihood-enhanced fast translation functions.似然增强快速翻译功能。
Acta Crystallogr D Biol Crystallogr. 2005 Apr;61(Pt 4):458-64. doi: 10.1107/S0907444905001617. Epub 2005 Mar 24.
9
Coot: model-building tools for molecular graphics.Coot:分子图形的模型构建工具。
Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 1):2126-32. doi: 10.1107/S0907444904019158. Epub 2004 Nov 26.
10
Refinement of macromolecular structures by the maximum-likelihood method.用最大似然法优化大分子结构。
Acta Crystallogr D Biol Crystallogr. 1997 May 1;53(Pt 3):240-55. doi: 10.1107/S0907444996012255.