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一种用于实体肿瘤生长建模的计算框架。

A computational framework for modelling solid tumour growth.

作者信息

Lloyd Bryn A, Szczerba Dominik, Rudin Markus, Székely Gábor

机构信息

Computer Vision Laboratory, ETH-Zürich, Sternwartstrasse 7, 8092 Zürich, Switzerland.

出版信息

Philos Trans A Math Phys Eng Sci. 2008 Sep 28;366(1879):3301-18. doi: 10.1098/rsta.2008.0092.

Abstract

The biology of cancer is a complex interplay of many underlying processes, taking place at different scales both in space and time. A variety of theoretical models have been developed, which enable one to study certain components of the cancerous growth process. However, most previous approaches only focus on specific aspects of tumour development, largely ignoring the influence of the evolving tumour environment. In this paper, we present an integrative framework to simulate tumour growth, including those model components that are considered to be of major importance. We start by addressing issues at the tissue level, where the phenomena are modelled as continuum partial differential equations. We extend this model with relevant components at the cellular or even sub-cellular level in a vertical fashion. We present an implementation of this framework, covering the major processes and treat the mechanical deformation due to growth, the biochemical response to hypoxia, blood flow, oxygenation and the explicit development of a vascular system in a coupled way. The results demonstrate the feasibility of the approach and its applicability to in silico studies of the influence of different treatment strategies (like the usage of novel anti-cancer drugs) for more effective therapy design.

摘要

癌症生物学是众多潜在过程在空间和时间上不同尺度的复杂相互作用。人们已经开发了各种理论模型,这些模型能够让人们研究癌症生长过程的某些组成部分。然而,大多数先前的方法仅关注肿瘤发展的特定方面,很大程度上忽略了不断演变的肿瘤环境的影响。在本文中,我们提出了一个综合框架来模拟肿瘤生长,包括那些被认为至关重要的模型组成部分。我们首先处理组织层面的问题,在这个层面上,现象被建模为连续偏微分方程。我们以垂直方式用细胞甚至亚细胞层面的相关组成部分扩展这个模型。我们展示了这个框架的一个实现,涵盖了主要过程,并以耦合方式处理由于生长引起的机械变形、对缺氧的生化反应、血流、氧合以及血管系统的明确发育。结果证明了该方法的可行性及其在计算机模拟研究不同治疗策略(如使用新型抗癌药物)对更有效治疗设计影响方面的适用性。

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