Han Bei, Cai Yajun, Hu Xiaomin, Yuan Zhiming
Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan 430071, China.
Wei Sheng Wu Xue Bao. 2008 May;48(5):602-7.
Bacillus sphaericus is unable to use hexose and pentoses as the sole carbon source, due to the lack of key enzymes in Embden-Meyerhof-Parnas pathway (EMP), Hexose Monophophate Pathway (HMP) and Entner-Doudoroff (ED) pathway, such as phosphofructokinase (PFK). Based on the genome sequence annotation results of B. sphaericus C3-41, the phosphofructokinase gene pfk was verified with a single copy on chromosome, the aim of this research is to analysis the EMP pathway in B. sphaericus further, and confirm the function of phosphofructokinase.
The methods of southern-blot of pfk gene among different B. sphaericus strains, pfk ORF cloning from C3-41 and expressing in Escherichia coli, the corresponding sequence analysis and anlignment were used.
The pfk ORF of B. sphaericus was composed of 960 bp nucleitides encoding a protein about 42 kDa, and the PFK sequence analysis showed it had the conservative amino acids-binding sites and an ATP-binding domain. The expression of pfk in recombinant E. coli strain could complement the PFK activity of a pfk mutated E. coli strain DF1020.
The expressed PFK had the conventional phosphofructokinase activity, and settled the foundation for the further research of catabolism of B. sphaericus.
球形芽孢杆菌由于缺乏糖酵解途径(EMP)、磷酸戊糖途径(HMP)和Entner-Doudoroff途径(ED)中的关键酶,如磷酸果糖激酶(PFK),无法将己糖和戊糖作为唯一碳源。基于球形芽孢杆菌C3-41的基因组序列注释结果,磷酸果糖激酶基因pfk在染色体上被验证为单拷贝,本研究的目的是进一步分析球形芽孢杆菌中的EMP途径,并确认磷酸果糖激酶的功能。
采用不同球形芽孢杆菌菌株中pfk基因的Southern杂交、从C3-41中克隆pfk开放阅读框并在大肠杆菌中表达、相应序列分析和比对等方法。
球形芽孢杆菌的pfk开放阅读框由960个核苷酸组成,编码一种约42 kDa的蛋白质,PFK序列分析表明它具有保守的氨基酸结合位点和一个ATP结合结构域。pfk在重组大肠杆菌菌株中的表达可以补充pfk突变大肠杆菌菌株DF1020的PFK活性。
表达的PFK具有传统的磷酸果糖激酶活性,为进一步研究球形芽孢杆菌的分解代谢奠定了基础。