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黄曲霉和寄生曲霉交配型基因的特征及群体分析

Characterization and population analysis of the mating-type genes in Aspergillus flavus and Aspergillus parasiticus.

作者信息

Ramirez-Prado Jorge H, Moore Geromy G, Horn Bruce W, Carbone Ignazio

机构信息

Center for Integrated Fungal Research, Department of Plant Pathology, North Carolina State University, Raleigh, NC 27695, USA.

出版信息

Fungal Genet Biol. 2008 Sep;45(9):1292-9. doi: 10.1016/j.fgb.2008.06.007. Epub 2008 Jul 3.

Abstract

We characterize the mating-type genes in Aspergillus flavus,Aspergillus parasiticus and Petromyces alliaceus. A single MAT1-1 or MAT1-2 gene was detected in the genomes of A. flavus and A. parasiticus, which is consistent with a potential heterothallic organization of MAT genes in these species. In contrast, the only known, functionally homothallic species in Aspergillus section Flavi, P. alliaceus, has tightly linked (<2kb) MAT1-1 and MAT1-2 genes, typical of other self-fertile homothallic euascomycetes. This is the first example of linked MAT genes within a homothallic species of Aspergillus. We tested the null hypothesis of no significant difference in the frequency of MAT1-1 and MAT1-2 in A. flavus and A. parasiticus sampled from a single peanut field in Georgia. For each species, mating-type frequencies were determined for the total population samples and for samples that were clone-corrected based on vegetative compatibility groups (VCGs) and aflatoxin gene cluster haplotypes. There was no significant difference in the frequency of the two mating types for A. flavus and A. parasiticus in either VCG or haplotype clone-corrected samples. The existence of both mating-type genes in equal proportions in A. flavus and A. parasiticus populations, coupled with their expression at the mRNA level and the high amino acid sequence identity of MAT1-1 (77%) and MAT1-2 (83%) with corresponding homologs in P. alliaceus, indicates the potential functionality of these genes and the possible existence of a sexual state in these agriculturally important species.

摘要

我们对黄曲霉、寄生曲霉和蒜臭曲霉的交配型基因进行了表征。在黄曲霉和寄生曲霉的基因组中检测到单个MAT1 - 1或MAT1 - 2基因,这与这些物种中MAT基因潜在的异宗配合组织一致。相比之下,曲霉属黄曲霉组中唯一已知的功能上同宗配合的物种——蒜臭曲霉,具有紧密连锁(<2kb)的MAT1 - 1和MAT1 - 2基因,这是其他能自育的同宗配合子囊菌的典型特征。这是曲霉属同宗配合物种中连锁MAT基因的首个实例。我们检验了从佐治亚州一个花生田采集的黄曲霉和寄生曲霉中MAT1 - 1和MAT1 - 2频率无显著差异的零假设。对于每个物种,分别测定了总群体样本以及基于营养体亲和群(VCGs)和平曲霉毒素基因簇单倍型进行克隆校正后的样本的交配型频率。在VCG或单倍型克隆校正样本中,黄曲霉和寄生曲霉的两种交配型频率均无显著差异。黄曲霉和寄生曲霉群体中两种交配型基因以相等比例存在,再加上它们在mRNA水平的表达以及MAT1 - 1(77%)和MAT1 - 2(83%)与蒜臭曲霉中相应同源物的高氨基酸序列同一性,表明这些基因具有潜在功能,并且这些在农业上重要的物种可能存在有性状态。

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