Yoon Min-Ho, Ten Leonid N, Im Wan-Taek, Lee Sung-Taik
Department of BioEnvironmental Chemistry, College of Agriculture and Life Sciences, Chungnam National University, Daejeon, Republic of Korea.
Int J Syst Evol Microbiol. 2008 Aug;58(Pt 8):1878-84. doi: 10.1099/ijs.0.64768-0.
A bacterial strain, designated X.bu-b T, with chitin-, xylan-, cellulose- and starch-degrading activities, was isolated from compost at a cattle farm near Daejeon, Republic of Korea. The strain comprised Gram-positive, aerobic or facultatively anaerobic, non-motile, rod-shaped bacteria. On the basis of an analysis of 16S rRNA gene sequences, the phylogenetic position of X.bu-b T was within the genus Cellulomonas, and the strain exhibited relatively high sequence similarities with respect to Cellulomonas biazotea DSM 20112T (98.1 %), C. cellasea DSM 20118T (98.1 %), C. fimi DSM 20113T (98.0 %), C. terrae DB5T (97.9 %), C. humilata ATCC 25174T (97.7 %), C. xylanilytica XIL11 T (97.5 %), C. uda DSM 20107T (97.4 %), C. gelida DSM 20111 T (97.3 %), C. iranensis OT (97.3 %) and C. flavigena DSM 20109T (97.0 %). The phylogenetic distance from other Cellulomonas species with validly published names was greater than 3 % (i.e. less than 97.0 % sequence similarity). Chemotaxonomic data also supported the classification of strain X.bu-b T within the genus Cellulomonas: L-ornithine was the cell-wall diamino acid, anteiso-C15:0 and anteiso-C17:0 were the major fatty acids, rhamnose, galactose, xylose and ribose were the cell-wall sugars, MK-9(H4) was the predominant menaquinone and diphosphatidylglycerol and phosphatidylglycerol were present in the polar lipids. The G+C content of the genomic DNA was 73.6 mol%. DNA-DNA hybridization experiments showed that the values for DNA-DNA relatedness between strain X.bu-b T and the phylogenetically closest neighbours were below 23 %. On the basis of its phenotypic properties and phylogenetic distinctiveness, strain X.bu-b T represents a novel species of the genus Cellulomonas, for which the name Cellulomonas chitinilytica sp. nov. is proposed. The type strain is X.bu-b T (=KCTC 19133T =DSM 17922T).
从韩国大田附近一个养牛场的堆肥中分离出一株具有几丁质、木聚糖、纤维素和淀粉降解活性的细菌菌株,命名为X.bu-b T。该菌株为革兰氏阳性、需氧或兼性厌氧、无运动性的杆状细菌。基于16S rRNA基因序列分析,X.bu-b T的系统发育位置在纤维单胞菌属内,该菌株与纤维单胞菌biazotea DSM 20112T(98.1%)、C. cellasea DSM 20118T(98.1%)、C. fimi DSM 20113T(98.0%)、C. terrae DB5T(97.9%)、C. humilata ATCC 25174T(97.7%)、C. xylanilytica XIL11 T(97.5%)、C. uda DSM 20107T(97.4%)Cl gelida DSM 20111 T(97.3%)、C. iranensis OT(97.3%)和C. flavigena DSM 20109T(97.0%)表现出相对较高的序列相似性。与其他已有效发表名称的纤维单胞菌属物种的系统发育距离大于3%(即序列相似性小于97.0%)。化学分类数据也支持将X.bu-b T菌株归类于纤维单胞菌属:L-鸟氨酸是细胞壁二氨基酸,anteiso-C15:0和anteiso-C17:0是主要脂肪酸,鼠李糖、半乳糖、木糖和核糖是细胞壁糖类,MK-9(H4)是主要的甲基萘醌,极性脂质中存在双磷脂酰甘油和磷脂酰甘油。基因组DNA的G+C含量为73.6 mol%。DNA-DNA杂交实验表明,X.bu-b T菌株与系统发育关系最密切的近缘菌株之间的DNA-DNA相关性值低于23%。基于其表型特性和系统发育独特性,X.bu-b T菌株代表纤维单胞菌属的一个新物种,为此提出名为几丁质纤维单胞菌(Cellulomonas chitinilytica sp. nov.)的名称。模式菌株为X.bu-b T(=KCTC 19133T =DSM 17922T)。