Siegbahn Per E M
Department of Physics, ALBA NOVA, Stockholm University, 106 91 Stockholm, Sweden.
Chemistry. 2008;14(27):8290-302. doi: 10.1002/chem.200800445.
In recent DFT studies a new mechanism for O-O bond formation at the oxygen evolving center (OEC) in photosystem II has been suggested. With the structure of the S(4) state required for that mechanism, the structures of the lower S states are investigated herein by adding protons and electrons. A model was used including the full amino acids for the ones ligating the OEC, and in which the backbone positions were held fixed from the X-ray structure. The only charged second-shell ligand Arg357 was also included. An optimized structure for the S(1) state was reached with a large similarity to one of those suggested by EXAFS. A full catalytic cycle was derived which can rationalize the structural relaxation in the S(2) to S(3) transition, and the fact that only an electron leaves in the transition before. Water is suggested to bind to the OEC in the S(2) to S(3), and S(4) to S(0) transitions. A new possibility for water exchange is suggested from the final energy diagram. The optimal O-O bond formation occurs between an oxygen radical and an oxo ligand. The alternative mechanism, where the oxygen radical reacts with an external water, has a barrier about 20 kcal mol(-1) higher.
在最近的密度泛函理论(DFT)研究中,有人提出了一种在光系统II的析氧中心(OEC)形成O-O键的新机制。基于该机制所需的S(4)态结构,本文通过添加质子和电子来研究较低S态的结构。使用了一个模型,其中包括与OEC配位的完整氨基酸,并且主链位置根据X射线结构保持固定。还包括唯一带电荷的第二壳层配体Arg357。得到了一个与扩展X射线吸收精细结构(EXAFS)所提出的结构之一非常相似的S(1)态优化结构。推导了一个完整的催化循环,该循环可以解释S(2)到S(3)转变中的结构弛豫,以及之前转变中只有一个电子离开的事实。有人提出水在S(2)到S(3)以及S(4)到S(0)转变中与OEC结合。从最终的能量图中提出了水交换的一种新可能性。最佳的O-O键形成发生在氧自由基和氧代配体之间。氧自由基与外部水反应的另一种机制的势垒高出约20千卡/摩尔。