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卤代乙酰胺基寡糖衍生物对胞质肽:N-聚糖酶的系统合成及抑制活性

Systematic synthesis and inhibitory activity of haloacetamidyl oligosaccharide derivatives toward cytoplasmic peptide:N-glycanase.

作者信息

Miyazaki Ayako, Matsuo Ichiro, Hagihara Shinya, Kakegawa Ayako, Suzuki Tadashi, Ito Yukishige

机构信息

The Institute of Physical and Chemical Research, Wako, Saitama, Japan.

出版信息

Glycoconj J. 2009 Feb;26(2):133-40. doi: 10.1007/s10719-008-9171-3. Epub 2008 Aug 10.

DOI:10.1007/s10719-008-9171-3
PMID:18695987
Abstract

A series of glycosyl haloacetamides were synthesized as potential inhibitors of cytoplasmic peptide:N-glycanase (PNGase), an enzyme that removes N-glycans from misfolded glycoproteins. Chloro-, bromo-, and iodoacetamidyl chitobiose and chitotetraose derivatives exhibited a significant inhibitory activity. No inhibitory activity was observed with of fluoroacetamididyl derivatives. Moreover, N-acetylglucosamine derivatives, beta-chloropropionamidyl chitobiose, and chloroacetamidyl cellooligosaccharide derivatives did not show any activity. These results underscore the importance of the N-acetyl groups of chitobiose for PNGase recognition. In addition, reactivity and position of the leaving group at the reducing end are also important factors.

摘要

合成了一系列糖基卤代乙酰胺,作为细胞质肽:N-聚糖酶(PNGase)的潜在抑制剂,该酶可从错误折叠的糖蛋白中去除N-聚糖。氯代、溴代和碘代乙酰氨基壳二糖及壳四糖衍生物表现出显著的抑制活性。氟代乙酰氨基衍生物未观察到抑制活性。此外,N-乙酰葡糖胺衍生物、β-氯丙酰氨基壳二糖和氯乙酰氨基纤维寡糖衍生物均未显示任何活性。这些结果强调了壳二糖的N-乙酰基对PNGase识别的重要性。此外,还原端离去基团的反应性和位置也是重要因素。

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本文引用的文献

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Bodipy-VAD-Fmk, a useful tool to study yeast peptide N-glycanase activity.硼二吡咯亚甲基 - VAD - Fmk,一种研究酵母肽 - N - 聚糖酶活性的有用工具。
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Fluorescently labeled inhibitor for profiling cytoplasmic peptide:N-glycanase.用于分析细胞质肽:N-聚糖酶的荧光标记抑制剂。
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Analysis of ER-associated glycoprotein degradation using synthetic glycopeptide probes.
证据表明,PNGase 在果蝇中具有必需的去糖基化非依赖性活性。
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The Neurospora peptide:N-glycanase ortholog PNG1 is essential for cell polarity despite its lack of enzymatic activity.神经孢菌素肽:N-糖基酶同源物 PNG1 尽管缺乏酶活性,但对细胞极性却是必需的。
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使用合成糖肽探针分析内质网相关糖蛋白降解
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Site-specific labeling of cytoplasmic peptide:N-glycanase by N,N'-diacetylchitobiose-related compounds.N,N'-二乙酰壳二糖相关化合物对细胞质肽:N-聚糖酶的位点特异性标记
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High-mannose-type glycan modifications of dihydrofolate reductase using glycan-methotrexate conjugates.
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The Png1-Rad23 complex regulates glycoprotein turnover.Png1-Rad23复合物调节糖蛋白周转。
J Cell Biol. 2006 Jan 16;172(2):211-9. doi: 10.1083/jcb.200507149. Epub 2006 Jan 9.
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z-VAD-fmk inhibits peptide:N-glycanase and may result in ER stress.z-VAD-fmk抑制肽:N-聚糖酶,并可能导致内质网应激。
Cell Death Differ. 2006 Jan;13(1):163-5. doi: 10.1038/sj.cdd.4401716.
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Structure of a peptide:N-glycanase-Rad23 complex: insight into the deglycosylation for denatured glycoproteins.一种肽:N-聚糖酶-Rad23复合物的结构:对变性糖蛋白去糖基化作用的深入了解。
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Chem Biol. 2004 Dec;11(12):1677-87. doi: 10.1016/j.chembiol.2004.11.010.