Shin Joon, Lee Woonghee, Lee Weontae
Department of Biochemistry, College of Life Science & Biotechnology, Yonsei University, Seodaemoon-Gu, Shinchon-dong, Seoul 120-740, Korea.
Expert Rev Proteomics. 2008 Aug;5(4):589-601. doi: 10.1586/14789450.5.4.589.
Structural proteomics is one of the powerful research areas in the postgenomic era, elucidating structure-function relationships of uncharacterized gene products based on the 3D protein structure. It proposes biochemical and cellular functions of unannotated proteins and thereby identifies potential drug design and protein engineering targets. Recently, a number of pioneering groups in structural proteomics research have achieved proof of structural proteomic theory by predicting the 3D structures of hypothetical proteins that successfully identified the biological functions of those proteins. The pioneering groups made use of a number of techniques, including NMR spectroscopy, which has been applied successfully to structural proteomics studies over the past 10 years. In addition, advances in hardware design, data acquisition methods, sample preparation and automation of data analysis have been developed and successfully applied to high-throughput structure determination techniques. These efforts ensure that NMR spectroscopy will become an important methodology for performing structural proteomics research on a genomic scale. NMR-based structural proteomics together with x-ray crystallography will provide a comprehensive structural database to predict the basic biological functions of hypothetical proteins identified by the genome projects.
结构蛋白质组学是后基因组时代强大的研究领域之一,它基于蛋白质三维结构阐明未表征基因产物的结构-功能关系。它提出了未注释蛋白质的生化和细胞功能,从而确定潜在的药物设计和蛋白质工程靶点。最近,一些结构蛋白质组学研究的先驱团队通过预测假设蛋白质的三维结构成功证明了结构蛋白质组学理论,这些假设蛋白质的三维结构成功鉴定了其生物学功能。这些先驱团队使用了多种技术,包括核磁共振光谱,在过去10年中,核磁共振光谱已成功应用于结构蛋白质组学研究。此外,硬件设计、数据采集方法、样品制备和数据分析自动化等方面都取得了进展,并成功应用于高通量结构测定技术。这些努力确保核磁共振光谱将成为在基因组规模上进行结构蛋白质组学研究的重要方法。基于核磁共振的结构蛋白质组学与X射线晶体学将提供一个全面的结构数据库,以预测基因组计划鉴定的假设蛋白质的基本生物学功能。