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沙眼衣原体 Scc4 的骨架和侧链共振分配及二级结构。

Backbone and sidechain resonance assignments and secondary structure of Scc4 from Chlamydia trachomatis.

机构信息

Department of Chemistry, Louisiana State University, Baton Range, LA, 70803, USA.

National Magnetic Resonance Facility at Madison and Biochemistry Department, University of Wisconsin- Madison, Madison, WI, 53706, USA.

出版信息

Biomol NMR Assign. 2020 Oct;14(2):301-307. doi: 10.1007/s12104-020-09965-4. Epub 2020 Jul 2.

DOI:10.1007/s12104-020-09965-4
PMID:32617786
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7540732/
Abstract

Chlamydia trachomatis is an obligate intracellular bacterium that causes the most common sexually transmitted bacterial diseases in the world. With a biphasic developmental cycle, the bacteria utilize a type III secretion system (T3SS) to invade host cells as infectious elemental bodies, which then differentiate into actively dividing reticulate bodies. The regulation of the developmental cycle and the T3SS are linked by the bi-functional protein, specific Chlamydia chaperone 4 (Scc4). Scc4 is a class I T3SS chaperone forming a heterodimer with specific Chlamydia chaperone 1 (Scc1) to chaperone the essential virulence effector, Chlamydia outer membrane protein N. Scc4 also functions as a transcription factor by binding to the RNA polymerase holoenzyme between the flap region of the β subunit and region 4 of σ. In order to investigate the mechanism behind Scc4's dual functions and target its protein-protein interactions as a route for drug development, the structure and dynamics of Scc4 are being pursued. In the course of this effort, we assigned 89.2% of the backbone and sidechain H, N, and C resonances of full-length Scc4. The assigned chemical shifts were used to predict the secondary structure and dynamic properties. The type and order of Scc4's determined secondary structure are consistent with the X-ray crystal structures of other bacterial T3SS chaperones.

摘要

沙眼衣原体是一种专性细胞内细菌,可引起世界上最常见的性传播细菌病。该细菌具有两相发育周期,利用 III 型分泌系统(T3SS)将感染元素体侵入宿主细胞,然后分化为活跃分裂的网状体。发育周期和 T3SS 的调节通过双功能蛋白,特异性沙眼衣原体伴侣 4(Scc4)连接。Scc4 是一种 I 类 T3SS 伴侣蛋白,与特异性沙眼衣原体伴侣 1(Scc1)形成异二聚体,伴侣必需的毒力效应因子,沙眼衣原体外膜蛋白 N。Scc4 还作为转录因子,通过结合 RNA 聚合酶全酶的β亚基的瓣状区和σ4 区起作用。为了研究 Scc4 双重功能背后的机制,并将其蛋白-蛋白相互作用作为药物开发的途径,正在研究 Scc4 的结构和动力学。在这一努力过程中,我们对全长 Scc4 的 89.2%的骨架和侧链 H、N 和 C 共振进行了归属。归属的化学位移用于预测二级结构和动态特性。Scc4 确定的二级结构的类型和顺序与其他细菌 T3SS 伴侣的 X 射线晶体结构一致。

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引用本文的文献

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Chain-Selective Isotopic Labeling of the Heterodimeric Type III Secretion Chaperone, Scc4:Scc1, Reveals the Total Structural Rearrangement of the Bi-Functional Protein, Scc4.链选择性同位素标记异源三聚体 III 型分泌接头蛋白 Scc4:Scc1,揭示双功能蛋白 Scc4 的总结构重排。
Biomolecules. 2020 Oct 24;10(11):1480. doi: 10.3390/biom10111480.

本文引用的文献

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J Bacteriol. 2020 Jul 9;202(15). doi: 10.1128/JB.00132-20.
2
Purification of Tag-Free Scc4 for Structural Studies Using Sarkosyl-Assisted on-Column Complex Dissociation.使用 Sarkosyl 辅助的柱上复合同位素解离法纯化无标签 Scc4 进行结构研究
Biochemistry. 2019 Oct 22;58(42):4284-4292. doi: 10.1021/acs.biochem.9b00665. Epub 2019 Oct 9.
3
Sparse multidimensional iterative lineshape-enhanced (SMILE) reconstruction of both non-uniformly sampled and conventional NMR data.
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J Biomol NMR. 2017 Jun;68(2):101-118. doi: 10.1007/s10858-016-0072-7. Epub 2016 Nov 19.
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Multipart Chaperone-Effector Recognition in the Type III Secretion System of Chlamydia trachomatis.沙眼衣原体Ⅲ型分泌系统中的多部分伴侣蛋白-效应蛋白识别
J Biol Chem. 2015 Nov 20;290(47):28141-28155. doi: 10.1074/jbc.M115.670232. Epub 2015 Oct 5.
5
The Phyre2 web portal for protein modeling, prediction and analysis.用于蛋白质建模、预测和分析的Phyre2网络门户。
Nat Protoc. 2015 Jun;10(6):845-58. doi: 10.1038/nprot.2015.053. Epub 2015 May 7.
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7
Protein backbone and sidechain torsion angles predicted from NMR chemical shifts using artificial neural networks.使用人工神经网络从 NMR 化学位移预测蛋白质主链和侧链扭转角。
J Biomol NMR. 2013 Jul;56(3):227-41. doi: 10.1007/s10858-013-9741-y. Epub 2013 Jun 2.
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