Wagschal Kurt, Heng Chamroeun, Lee Charles C, Wong Dominic W S
USDA Agricultural Research Service, Western Regional Research Center, 800 Buchanan Street, Albany, CA 94710, USA.
Appl Microbiol Biotechnol. 2009 Jan;81(5):855-63. doi: 10.1007/s00253-008-1662-4. Epub 2008 Sep 2.
The gene encoding a glycoside hydrolase family 43 enzyme termed deAX was isolated and subcloned from a culture seeded with a compost starter mixed bacterium population, expressed with a C-terminal His(6)-tag, and purified to apparent homogeneity. deAX was monomeric in solution and had a broad pH maximum between pH 5.5 and pH 7. A twofold greater k (cat)/K (m) for the p-nitrophenyl derivative of alpha-L: -arabinofuranose versus that for the isomeric substrate beta-D-xylopyranose was due to an appreciably lower K (m) for the arabinofuranosyl substrate. Substrate inhibition was observed for both 4-methylumbelliferryl arabinofuranoside and the xylopyranoside cogener. While no loss of activity was observed over 4 h at 40 degrees C, the observed t (1/2) value rapidly decreased from 630 min at 49 degrees C to 47 min at 53 degrees C. The enzyme exhibited end-product inhibition, with a K (i) for xylose of 145 mM, 18.5 mM for arabinose, and 750 mM for glucose. Regarding natural substrate specificity, deAX had arabinofuranosidase activity on sugar beet arabinan, 1,5-alpha-L-arabinobiose, and 1,5-alpha-L-arabinotriose, and wheat and rye arabinoxylan, while xylosidase activity was detected for the substrates xylobiose, xylotriose, xylotetraose, and arabinoxylan from beech and birch. Thus, deAX can be classified as a dual-function xylosidase/arabinofuranosidase with respect to both artificial and natural substrate specificity.
从接种了堆肥发酵剂混合细菌群体的培养物中分离并亚克隆了编码一种名为deAX的糖苷水解酶家族43酶的基因,该酶带有C端His(6)标签进行表达,并纯化至表观均一性。deAX在溶液中为单体,在pH 5.5至pH 7之间有较宽的最适pH值。α-L-阿拉伯呋喃糖的对硝基苯基衍生物的k (cat)/K (m)值是其同分异构体底物β-D-木吡喃糖的两倍,这是由于阿拉伯呋喃糖基底物的K (m)明显较低。对4-甲基伞形酮阿拉伯呋喃糖苷和木吡喃糖苷共底物均观察到底物抑制。虽然在40℃下4小时内未观察到活性损失,但观察到的t (1/2)值从49℃时的630分钟迅速降至53℃时的47分钟。该酶表现出终产物抑制,木糖的K (i)为145 mM,阿拉伯糖为18.5 mM,葡萄糖为750 mM。关于天然底物特异性,deAX对甜菜阿拉伯聚糖、1,5-α-L-阿拉伯二糖和1,5-α-L-阿拉伯三糖以及小麦和黑麦阿拉伯木聚糖具有阿拉伯呋喃糖苷酶活性,而对木二糖、木三糖、木四糖以及山毛榉和桦木的阿拉伯木聚糖等底物检测到木糖苷酶活性。因此,就人工和天然底物特异性而言,deAX可归类为双功能木糖苷酶/阿拉伯呋喃糖苷酶。