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基于第一性原理和结构的人体肝脏代谢清除率值预测。

First-principle, structure-based prediction of hepatic metabolic clearance values in human.

作者信息

Li Haiyan, Sun Jin, Sui Xiaofan, Liu Jianfang, Yan Zhongtian, Liu Xiaohong, Sun Yinghua, He Zhonggui

机构信息

Department of Biopharmaceutics, School of Pharmacy, Shenyang Pharmaceutical University, No. 59 Mailbox, No. 103 of Wenhua Road, Shenyang 110016, China.

出版信息

Eur J Med Chem. 2009 Apr;44(4):1600-6. doi: 10.1016/j.ejmech.2008.07.027. Epub 2008 Jul 26.

Abstract

The first-principle, quantitative structure-hepatic clearance relationship for 50 drugs was constructed based on selected molecular descriptors calculated by TSAR software. The R(2) of the predicted and observed hepatic clearance for the training set (n=36) and test set (n=13) were 0.85 and 0.73, respectively. The average fold error (AFE) of the in silico model was 1.28 (n=50). The prediction accuracy of in silico model was superior to in vitro hepatocytes' model in literature (n=50, AFE=2.55). It is attractive to predict human hepatic clearance based on molecular descriptors merely. The structure-based model can be used as an efficient tool in the rapid identification of hepatic clearance of new drug candidates in drug discovery.

摘要

基于TSAR软件计算出的选定分子描述符,构建了50种药物的第一性原理定量结构-肝脏清除率关系。训练集(n = 36)和测试集(n = 13)预测的和观察到的肝脏清除率的R(2)分别为0.85和0.73。计算机模拟模型的平均倍数误差(AFE)为1.28(n = 50)。计算机模拟模型的预测准确性优于文献中的体外肝细胞模型(n = 50,AFE = 2.55)。仅基于分子描述符预测人体肝脏清除率很有吸引力。基于结构的模型可作为药物研发中快速鉴定新候选药物肝脏清除率的有效工具。

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