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一名中国个体中新型HLA-Cw*0340等位基因的基于序列的分型特征分析

Sequence-based typing characterization of the novel HLA-Cw*0340 allele in a Chinese individual.

作者信息

Cheng L-H, Li Z, Jin S-Z, Zou H-Y

机构信息

Immunogenetic Laboratory, Shenzhen Institute of Transfusion Medicine, Shenzhen Blood Center, Shenzhen, Guangdong, China.

出版信息

Tissue Antigens. 2008 Nov;72(5):495-7. doi: 10.1111/j.1399-0039.2008.01117.x. Epub 2008 Sep 5.

DOI:10.1111/j.1399-0039.2008.01117.x
PMID:18778328
Abstract

The novel human leukocyte antigen (HLA)-Cw0340 allele was identified by sequence-based typing in a Chinese individual. This allele shows that the sequences of exons 2-3 of HLA-Cw0340 are identical to those of HLA-Cw0302, except for a nucleotide substitution that changes CTC to ATC at codon 95, resulting in an amino acid change from Leu to lle in the protein; this allele also shows that the sequences of exons 2-3 of HLA-Cw0340 are identical to those of HLA-Cw030401 or HLA-Cw030403, except for a nucleotide substitution that changes TAC to TCC at codon 116, resulting in an amino acid change from Try to Ser in the protein.

摘要

通过基于序列的分型方法,在中国个体中鉴定出了新型人类白细胞抗原(HLA)-Cw0340等位基因。该等位基因显示,HLA-Cw0340外显子2-3的序列与HLA-Cw0302的序列相同,只是在第95密码子处有一个核苷酸替换,将CTC变为ATC,导致蛋白质中的氨基酸从Leu变为Ile;该等位基因还显示,HLA-Cw0340外显子2-3的序列与HLA-Cw030401或HLA-Cw030403的序列相同,只是在第116密码子处有一个核苷酸替换,将TAC变为TCC,导致蛋白质中的氨基酸从Try变为Ser。

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