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从鲟鱼中分离出的疱疹病毒之间的系统发育关系修订版。

Revised phylogenetic relationships among herpesviruses isolated from sturgeons.

作者信息

Kurobe Tomofumi, Kelley Garry O, Waltzek Thomas B, Hedrick Ronald P

机构信息

Department of Medicine and Epidemiology, School of Veterinary Medicine, University of California, Davis, CA 95616, USA.

出版信息

J Aquat Anim Health. 2008 Jun;20(2):96-102. doi: 10.1577/H07-028.1.

Abstract

Initial phylogenetic comparisons based on a region of the DNA polymerase of seven herpes-like viruses found in sturgeons in North America and Europe indicated the presence of three distinct clades. A revised phylogenetic analysis of the same viruses, based on corrected DNA polymerase sequences and newly obtained sequence data from the putative ATP subunit of the terminase gene, indicate only two clades. These two clades correspond to the historical designations given to these herpes-like viruses from white sturgeon Acipenser transmontanus: white sturgeon herpesvirus type 1 (WSHV-1) and type 2 (WSHV-2). The identification of putative terminase gene sequences for all seven herpes-like viruses from sturgeons confirms their affinity with the family Herpesviridae (because this gene is unique to herpesviruses) and more distantly with T4-like bacteriophages. The two clades of sturgeon herpesviruses are therefore appropriately designated as Acipenserid herpesviruses 1 and 2, which correspond to the previous common names of white sturgeon herpesvirus types 1 and 2.

摘要

基于在北美和欧洲鲟鱼中发现的七种类疱疹病毒的DNA聚合酶区域进行的初步系统发育比较表明存在三个不同的进化枝。基于校正后的DNA聚合酶序列以及从末端酶基因的假定ATP亚基新获得的序列数据,对相同病毒进行的修订系统发育分析表明仅存在两个进化枝。这两个进化枝对应于来自白鲟(Acipenser transmontanus)的这些类疱疹病毒的历史命名:白鲟疱疹病毒1型(WSHV-1)和2型(WSHV-2)。对来自鲟鱼的所有七种类疱疹病毒的假定末端酶基因序列的鉴定证实了它们与疱疹病毒科的亲缘关系(因为该基因是疱疹病毒特有的),并且与T4样噬菌体的亲缘关系更远。因此,鲟鱼疱疹病毒的两个进化枝被适当地命名为鲟鱼疱疹病毒1和2,它们对应于先前白鲟疱疹病毒1型和2型的通用名称。

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