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Analysis of mutant tRNA gene transcripts in vivo in Saccharomyces cerevisiae by abortive primer extension.

作者信息

Wilhelm M L, Wilhelm F X, Ebel J P

机构信息

Institut de Biologie Moléculaire et Cellulaire, Strasbourg, France.

出版信息

Anal Biochem. 1991 Jul;196(1):156-60. doi: 10.1016/0003-2697(91)90132-d.

DOI:10.1016/0003-2697(91)90132-d
PMID:1888029
Abstract

When the primer extension of a synthetic oligonucleotide hybridized to a complementary region of RNA is made in the presence of only three deoxyribonucleosides triphosphates, elongation of the primer stops as soon as the missing nucleotide is needed. This abortive primer extension assay has been adapted to analyse tRNA gene transcripts and has two main advantages. First it is specific and allows the identification of particular tRNA gene products in an homologous system provided the gene bears a point mutation. Second, it is highly sensitive and can be used to complement and confirm results of Northern blot hybridization. This assay should be a useful tool in the further in vivo study of the transcription and processing of particular tRNA genes in the homologous system. In this report the expression of wild-type and mutant yeast Sup4- tyrosine inserting suppressor gene was studied.

摘要

相似文献

1
Analysis of mutant tRNA gene transcripts in vivo in Saccharomyces cerevisiae by abortive primer extension.
Anal Biochem. 1991 Jul;196(1):156-60. doi: 10.1016/0003-2697(91)90132-d.
2
Pleiotropic effect of a point mutation in the yeast SUP4-o tRNA gene: in vivo pre-tRNA processing in S. cerevisiae.酵母SUP4-o tRNA基因中一个点突变的多效性效应:酿酒酵母体内前体tRNA加工
Nucleic Acids Res. 1992 Feb 25;20(4):791-6. doi: 10.1093/nar/20.4.791.
3
Primer extension analysis of tRNA gene transcripts synthesized in vitro and in vivo.对体外和体内合成的tRNA基因转录本进行引物延伸分析。
Anal Biochem. 1987 May 1;162(2):466-75. doi: 10.1016/0003-2697(87)90422-2.
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The use of a synthetic tRNA gene as a novel approach to study in vivo transcription and chromatin structure in yeast.
Nucleic Acids Res. 1991 Jul 25;19(14):3849-55. doi: 10.1093/nar/19.14.3849.
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TFIIIC-independent in vitro transcription of yeast tRNA genes.酵母tRNA基因的不依赖TFIIIC的体外转录
J Mol Biol. 2000 Jun 9;299(3):601-13. doi: 10.1006/jmbi.2000.3783.
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Exon sequence and structure requirements for tRNA splicing in Saccharomyces cerevisiae.酿酒酵母中tRNA剪接的外显子序列和结构要求。
Biochemistry. 1992 Mar 3;31(8):2359-67. doi: 10.1021/bi00123a022.
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SPL1-1, a Saccharomyces cerevisiae mutation affecting tRNA splicing.SPL1-1,一种影响酵母tRNA剪接的酿酒酵母突变体。
J Bacteriol. 1993 Mar;175(5):1433-42. doi: 10.1128/jb.175.5.1433-1442.1993.
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Maf1, repressor of tRNA transcription, is involved in the control of gluconeogenetic genes in Saccharomyces cerevisiae.Maf1,一种 tRNA 转录抑制剂,参与调控酿酒酵母的糖异生基因。
Gene. 2013 Aug 15;526(1):16-22. doi: 10.1016/j.gene.2013.04.055. Epub 2013 May 5.
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tRNA gene transcription in yeast: effects of specified base substitutions in the intragenic promoter.酵母中转运RNA基因的转录:基因内启动子中特定碱基替换的影响
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Effects of alterations in the 3' flanking sequence on in vivo and in vitro expression of the yeast SUP4-o tRNATyr gene.3'侧翼序列改变对酵母SUP4-o tRNATyr基因体内和体外表达的影响。
EMBO J. 1985 Oct;4(10):2657-64. doi: 10.1002/j.1460-2075.1985.tb03984.x.

引用本文的文献

1
Expression of variant nuclear Arabidopsis tRNA(Ser) genes and pre-tRNA maturation differ in HeLa, yeast and wheat germ extracts.拟南芥变异型细胞核tRNA(Ser)基因的表达及前体tRNA成熟在人宫颈癌HeLa细胞、酵母和麦胚提取物中存在差异。
Mol Gen Genet. 1992 May;233(1-2):201-8. doi: 10.1007/BF00587580.
2
Pleiotropic effect of a point mutation in the yeast SUP4-o tRNA gene: in vivo pre-tRNA processing in S. cerevisiae.酵母SUP4-o tRNA基因中一个点突变的多效性效应:酿酒酵母体内前体tRNA加工
Nucleic Acids Res. 1992 Feb 25;20(4):791-6. doi: 10.1093/nar/20.4.791.